Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2474 ATGAAGTTTCCAGGAATTAATAATGAGTTGCAGATGATTTTGGATGCTAAAATGGACGAAGTGTCTGCTAGAAGGCGCGCTCGTGAGGCCTTCAAGGATGTTCAGCTTGGGATTGACCATATACTGTTTAAGACTCCTTGCGATGGACTAAAAATGAAGGAGTCATTTGAGGTGAACTCAAGGGGTGTAGAAATTTTCTGTAAAACTTGGCTTCCCGGGACTGCTAGGCCAAAAGCGGCTGTGTTTTACTGTCATGGTTACGGTGACACTTGCACTTTTTTCTTTGAAGGAATAGCTAGAAAATTAGCATCGTCTGGATATGGAGTTTTCGCTATGGATTATCCAGGATTTGGTCTTTCAGAAGGTCTACATTGCTATATTCCCAGTTTCGATGGGCTTGTTGATGATGTTATTGAGCAGTACTGCAAAATCAAAGAAAACCCAGAATTCCGTTCTATTCCAAGCTTCCTCTTTGGACAGTCTATGGGTGGAGCAGTTGCTTTGAAGATGCATCTTAAACAACCTAATGCCTGGGATGGTGCCATTCTTGTTGCACCTATGTGTAAAATTGCAGATGACATGGTTCCGCCAAAGTTGCTAGCGCAGATTCTCATTGGCATAGCAAATGTTCTTCCAAAGCTCAAGTTAGTTCCACAGAAGGATTTAGCAGTGGCAGCATTTAGAGAATCAAAGAAGAGAGAAATGACAGCCTACAATGTTGTTGCTTACAAGGATAAACCACGGTTGAGGACTGCTGTTGAAATGCTCAAAACTACTCAAGAAATCGAACAGAGATTGGAAGAAGTGTCTCTGCCATTGCTAATCCTTCATGGTGAGGCTGATATAGTTACTGATCCCTCTGTGAGCAAAGCATTCTACGAGAAAGCTAGCAGTTCAGACAAGAAGCTTAAACTTTACAAGGATGCCTACCATTCTCTTCTTGAGGGTGAGCCGGATGAAGTAATAATCCAAGTTCTCAGTGACATCATTTTATGGCTTGATGAGCACAGCTTGAAACATTCTTCATCTTCCTCTTAA 1038 0.4191 MKFPGINNELQMILDAKMDEVSARRRAREAFKDVQLGIDHILFKTPCDGLKMKESFEVNSRGVEIFCKTWLPGTARPKAAVFYCHGYGDTCTFFFEGIARKLASSGYGVFAMDYPGFGLSEGLHCYIPSFDGLVDDVIEQYCKIKENPEFRSIPSFLFGQSMGGAVALKMHLKQPNAWDGAILVAPMCKIADDMVPPKLLAQILIGIANVLPKLKLVPQKDLAVAAFRESKKREMTAYNVVAYKDKPRLRTAVEMLKTTQEIEQRLEEVSLPLLILHGEADIVTDPSVSKAFYEKASSSDKKLKLYKDAYHSLLEGEPDEVIIQVLSDIILWLDEHSLKHSSSSS* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2474 345 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 10 341 - -
Lja1g2474 345 Pfam Serine aminopeptidase, S33 76 318 IPR022742 -
Lja1g2474 345 PANTHER PHOSPHOLIPASE-RELATED 10 341 - -
Lja1g2474 345 PRINTS Alpha/beta hydrolase fold signature 273 287 IPR000073 -
Lja1g2474 345 PRINTS Alpha/beta hydrolase fold signature 106 121 IPR000073 -
Lja1g2474 345 PRINTS Alpha/beta hydrolase fold signature 157 170 IPR000073 -
Lja1g2474 345 SUPERFAMILY alpha/beta-Hydrolases 41 335 IPR029058 -
Lja1g2474 345 Gene3D alpha/beta hydrolase 50 340 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2474 Lja-Chr1 28610143 28613889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2474 7 344 Acyl Lipid Metabolism Gene Families AT5G16120 72.189 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2474 K18368 - gmx:100782441 582.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2474 1 28610143 28613889 Lja1g2474 1 28610143 28613889 ECH