Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2410 ATGGAGAGCAGCTGCAAGAGGGAGGTGGCCATCATAGGTGCAGGTATTAGTGGCCTTCTAGCGTGTAAGTACATCCTCGCCAAAGGCTTCCATCCAATTGTTTTTGAGGCCAAAAGCAGCATTGGAGGAGTGTGGACCAAAACCTTTGAGACCACAAAACTCCAAACTCCCAAATCACTCTTTCAATTCTCTGATTTTCCATGGCCATCTTCTGTAACTGAAGAATTCCCCGACCAGCATCAGGTGCTGAGTTACATTACAGCTTATGCTCACCACCATGACCTGCTCAAGCATATCAAGTTCAATTCTCAAGTCCAAGGAATTCACTATGAAGGCCCTCCTTTTGAAGAGATGCAGGCGTGGCATCTCTGTGGTGGAACAGGTGACCCTTTCACCTCCAAAGGAAAATGGACACTTTCAGTCAAGAATACCCAACTCCAACTGGATTCAAATTCAACTCAGGTATATAGTGTAGATTTTGTGATTCTATGCATTGGTCGGTTCAGTGATGTTCCCAACATTCCAGAATTTCCTCCAAACAGTGGTCCAGAAATCTTCCAAGGGAAGGTGATACACTCCATGGAGTATGCCTCCATGGATGATCAAAGTGCAGCAGAGCTCGTCAAAGGAAAGCAAGTCACCATTGTTGGATTACAGAAATCTGCTCTAGACATTGCAATGGAGTGCTCCGCAGTAAATGGGGTTAAGTATCCTTGCAGAGTCCTGTACAGAACAGAACACTGGCACATTTCAGACTACTTTCCATGGGGCGTACCTTTGGCTAATTTGTATCTCAATCGTTTCTCAGAACTCATGGTTCATAAGCCTAATGAAGGCTTCCTGCTCAGTGTCCTTGCCACTGTTCTTGCACCTCTGAGATGGGCAATCTCGAAATTTGTTGAAAGTCATATAAGAAGGAAGCACGGTTTGGCAAAGTTTGGGATGGTACCAGATCACAGCTTCCATCAAACAGTGAATTCTTGTTTGTTTTCAACGGTGCCGGAAAAATTCTATGAGAAAGTGGAAGAGGGAAGTATCATGTTGAAGAAAGCTCCCAGGTTTTGGTTCTGCAAAGAGGGCGTTTTGGTTGATGGAGAAGAAGCCTCTACCTCGCCCTTGAAGACAGATTTTGTCATATTAGGTACTGGGTTCAGGGGTGACAAGAAGCTCAAAGACATGTTCGTGTCTTCATATTTTCAAAACCTTATAGCGCCCTCTCCAAATGCAAGTACTCCATTATATAGGGACTGCATCCATCCCCAGATTCCACAAGTGGCAGTGATTGGATTCGCGGAAAGTGCTTCTAATTTGTTTACCTCAGAGATTCGGTGCCGTTGGGTTGCGGAGCTATTGGATGGGACATTCCAAGTGCCAAACATTGAGGAGATGAAGAAAGATGTGAAGGAATGGGAGGAATACATGAAGAAATACTCGGGGCCATACTACACGAGGTCATGCATAGTAGGCTTGCACATATGGTACGCTGATCAACTATGCAAGGACATGGGATTGAACCCTAAACGAAAGAAAGGACTGCTCGCTGAGCTATTTCAGCCTTATGGGCTATGGCCCTTTGGAATATTCTCCTTCTTAATCCATGTTGGTTGTAAAACATGCATAACCATCATCAACACTCCCGCTATGAGAGTGATGTTAGATTTATTTATAATTAACTCTCTTTTTTTTTATGTGGATTAA 1698 0.4411 MESSCKREVAIIGAGISGLLACKYILAKGFHPIVFEAKSSIGGVWTKTFETTKLQTPKSLFQFSDFPWPSSVTEEFPDQHQVLSYITAYAHHHDLLKHIKFNSQVQGIHYEGPPFEEMQAWHLCGGTGDPFTSKGKWTLSVKNTQLQLDSNSTQVYSVDFVILCIGRFSDVPNIPEFPPNSGPEIFQGKVIHSMEYASMDDQSAAELVKGKQVTIVGLQKSALDIAMECSAVNGVKYPCRVLYRTEHWHISDYFPWGVPLANLYLNRFSELMVHKPNEGFLLSVLATVLAPLRWAISKFVESHIRRKHGLAKFGMVPDHSFHQTVNSCLFSTVPEKFYEKVEEGSIMLKKAPRFWFCKEGVLVDGEEASTSPLKTDFVILGTGFRGDKKLKDMFVSSYFQNLIAPSPNASTPLYRDCIHPQIPQVAVIGFAESASNLFTSEIRCRWVAELLDGTFQVPNIEEMKKDVKEWEEYMKKYSGPYYTRSCIVGLHIWYADQLCKDMGLNPKRKKGLLAELFQPYGLWPFGIFSFLIHVGCKTCITIINTPAMRVMLDLFIINSLFFYVD* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2410 565 PIRSF FMO 5 518 IPR000960 GO:0050660|GO:0050661
Lja1g2410 565 PANTHER DIMETHYLANILINE MONOOXYGENASE 5 521 - -
Lja1g2410 565 SUPERFAMILY FAD/NAD(P)-binding domain 364 528 IPR036188 -
Lja1g2410 565 Pfam Flavin-binding monooxygenase-like 7 507 IPR020946 GO:0004499|GO:0050660|GO:0050661
Lja1g2410 565 Gene3D - 6 183 IPR036188 -
Lja1g2410 565 PANTHER FLAVIN-CONTAINING MONOOXYGENASE 1-RELATED 5 521 - -
Lja1g2410 565 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Lja1g2410 565 Gene3D - 336 517 IPR036188 -
Lja1g2410 565 Gene3D - 184 263 IPR036188 -
Lja1g2410 565 SUPERFAMILY FAD/NAD(P)-binding domain 7 281 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2410 Lja-Chr1 27819056 27821371 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2410 K00485 - qsu:111983369 787.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2410 1 27819056 27821371 Lja1g2410 1 27819056 27821371 ECH