Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2409 ATGGCAGTGCTGAGTCTACCAACAGCTCCTGTGAGTGTGAGTGTCCAAACATCAAGACGCTACTGCGCTGTGGTAGCGCCCACCACAGTGGTAATTCCTCTTTCCCTTCCAGGAAAAGGAAGAGGAAGAGGAAGATTGAGGGTGAGATGCAGTGCGGAAGTTGACAGCAGAGGAGGAGGAGGGGTTGTGAATATGGGCCCCGGGACTCCTGTGAGGGCAACCAACATTCTGGTGGTCGGTGCTACCGGAACCCTCGGAAGGCAGATTGTGAGGCGTGCTCTCGACGAAGGCTACGACGTTAGATGCCTCGTCCGGCCCAGGCCTGCTCCTGCTGACTTCCTTCGCGATTGGGGCGCAACCGTTGTCAATGCTGACCTCACTAAGCCAGAGACAATTCCTGCTACCTTGGTAGGCGTACATACTGTTATTGACTGCGCCACAGGTCGTCCCGAGGAGCCCATCAGAACTGTAGATTGGGAAGGGAAAGTTGCTCTGATACAATGTGCGAAAGCAATGGGAATTCAGAAATATGTCTTTTATTCCATCCATAACTGCGACAAACATCCCGAGGTCCCCCTCATGGAGATCAAGTATTGCACCGAGAAGTTCCTCCGTGATTCTGGCCTCAATCACACTGTTATCCGCTTATGCGGTTTCATGCAAGGTCTTATTGGCCAGTACGCTGTGCCTATCCTTGAAGAAAAATCTGTTTGGGGAACTGATGCCCCCACCAGAATTGCTTACATGGATACTCAGGATATAGCTCGCTTGACTTTTATAGCCTTGCGAAATGAAAAAATCAATGGCAATCTTCTTACGTTTGCTGGTCCTCGTGCATGGACAACCCAGGAGGTGATAACATTGTGCGAGAGGCTTGCAGGCCAAGATGCTAATGTTACTACAGTTCCTGTCTCCATTTTAAGAATCACTCGTCAGATCACAAGGTTCTTTGAGTGGACAAGTGATGTTGCTGACAGATTGGCATTTTCAGAGGTGCTTACCAGCGACACTATTTTCTCTGTTCCGATGGCGGAGACATATAATCTTCTTGGTGTGGATTCAAAAGATATAGTTTCATTAGAGAAGTATTTGCAGGACTACTTCAGTAACATATTGAAGAAATTGAAGGATCTTAAAGCCCAGTCAAAGCAATCAGATATTTACTTCTGA 1170 0.4812 MAVLSLPTAPVSVSVQTSRRYCAVVAPTTVVIPLSLPGKGRGRGRLRVRCSAEVDSRGGGGVVNMGPGTPVRATNILVVGATGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLTKPETIPATLVGVHTVIDCATGRPEEPIRTVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEKFLRDSGLNHTVIRLCGFMQGLIGQYAVPILEEKSVWGTDAPTRIAYMDTQDIARLTFIALRNEKINGNLLTFAGPRAWTTQEVITLCERLAGQDANVTTVPVSILRITRQITRFFEWTSDVADRLAFSEVLTSDTIFSVPMAETYNLLGVDSKDIVSLEKYLQDYFSNILKKLKDLKAQSKQSDIYF* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2409 389 PANTHER - 28 389 IPR044256 -
Lja1g2409 389 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 76 337 IPR036291 -
Lja1g2409 389 Pfam NmrA-like family 76 297 IPR008030 -
Lja1g2409 389 Gene3D - 75 341 - -
Lja1g2409 389 CDD SDR_a5 75 278 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2409 - - gmx:100797608 646.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2409 1 27806871 27811008 Lja1g2409 1 27806871 27811008 ECH