Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2401 ATGTCAATCTTATCCATTTCCTCACCTCCAATCTCTTCATCTTCGTTTTCACTTTCAATTTCATCTACTCGCATGCCATGCTTCAATTTCAGGGTTTCATTCCCCCAATCGCAAAAGAGAGGGAACCGTGTGGTCATGATGAGCATGGAAGCAGGTGTCGGAGTCATGGGAACCAAGTTGGGAATGATGAGCTATTTCGAAGAAAACGGTGTCGTTGTTCCGGTCACTGTCGTCGGTTTCAAAGAAGGTAACATCGTCACGCAACTCAAAACCGAAGCCACTGATGGCTACGACGCTGTTCAAGTTGGTTACCAGAGGATCCGGGACCGCAAGCTCACCAAACCTGAGTTGGGTCATCTTGAGAAGGTTGGTGCTATCCCCATGCGCCATCTTCAGGAGTTTCGCCTTCAATCGCTTGAGGGTTTCGACCTCAACCAGCGCCTTGTTTTCGATGAACTGTTCAAGGAGGGTGATCTTGTTGATGTCTCTGGCACCACCATTGGCAAGGGTTTCCAAGGTGGTATCAAGCGATGGAACTTCAAAAGGGGTCCAATGAGCCATGGTTCTAAGAGTCATAGACAACTGGGATCAATCGGCGCCGGAACTACACCTGGTCGTGTATACCCTGGAAAGAAGATGCCCGGTAGGATGGGTGGAACCAAGAGGAAGATAAGAAAGCTTAAAATTGTCAAAATTGATAAAGATCTGAATGTGGTAATGATCAAAGGTGCTCTTCCTGGTAAGCCAGGGAATCTTCTGCGGATAACTCCAGCCAAGATTGTAGGGAAGAACATTCCAAAGAATTAG 807 0.4734 MSILSISSPPISSSSFSLSISSTRMPCFNFRVSFPQSQKRGNRVVMMSMEAGVGVMGTKLGMMSYFEENGVVVPVTVVGFKEGNIVTQLKTEATDGYDAVQVGYQRIRDRKLTKPELGHLEKVGAIPMRHLQEFRLQSLEGFDLNQRLVFDELFKEGDLVDVSGTTIGKGFQGGIKRWNFKRGPMSHGSKSHRQLGSIGAGTTPGRVYPGKKMPGRMGGTKRKIRKLKIVKIDKDLNVVMIKGALPGKPGNLLRITPAKIVGKNIPKN* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2401 268 Hamap 50S ribosomal protein L3 [rplC]. 52 259 IPR019927 GO:0003735|GO:0005840|GO:0006412
Lja1g2401 268 ProSitePatterns Ribosomal protein L3 signature. 154 177 IPR019926 -
Lja1g2401 268 PANTHER 50S RIBOSOMAL PROTEIN L3 47 267 IPR019927 GO:0003735|GO:0005840|GO:0006412
Lja1g2401 268 MobiDBLite consensus disorder prediction 181 220 - -
Lja1g2401 268 TIGRFAM L3_bact: 50S ribosomal protein uL3 54 255 IPR019927 GO:0003735|GO:0005840|GO:0006412
Lja1g2401 268 PANTHER 50S RIBOSOMAL PROTEIN L3-1, CHLOROPLASTIC 47 267 - -
Lja1g2401 268 Gene3D - 85 142 - -
Lja1g2401 268 Gene3D Translation factors 180 260 - -
Lja1g2401 268 SUPERFAMILY Translation proteins 53 264 IPR009000 -
Lja1g2401 268 Pfam Ribosomal protein L3 147 234 IPR000597 GO:0003735|GO:0005840|GO:0006412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2401 K02906 - gmx:100802392 417.927