Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2390 ATGATGGCGGCTTCCAACGGAACAGCAAGTAACCCCAACTGTCCTCATGCTTCTAATCCGTACCATCAATGCACCCAAGCTTGCTCCAAAAAGACCAGCCACCGAACCAAACCACACGCTAAGAACACTTCTTCATCAGGTTATCAACGGAGCGCAACAGATGGTGAGCCCGGCAGCAAAAACACAAACAGAACACACTCAGGTTGTCCTAAAGCATCTAATCCTTACCATCACTGTGATCACAATTGTTTAACCGCTTCAGGTGCCGCGCCTCCTCCTTCAAATTTTGACAGGAGAAAGAAGCCAGGTTCTAGGCCAGAACCCCCTGTTGTTGCCGGCGCTGTTCCAGCCGCAAAAGTTGAAGCGATTCAGAAGTCTAATGCTTCATCACCAATATCAAATCATTCTGAGATAAAAAAGGTGGAGTCAAGAAACGATGATCACAATCATTCTGTACCAGTTTCTGGACAAATACATGTCCCACTCCCAGTCCCTGATGTTAAGCATGTCCATGAAGAAGACCAACAAAAAAATGGTGTAGAGCACCTTGCCAATCCAATTCAAACAAAACAAGAGGACAAAACTGCTTCTGATGTCCACCCTGGAGAAGGTCTTGCTACTACTTTCAAAGGTGGATCCATAGATTTTAGTTTCTCTGGTATTATTCCACAGGGCAATGAAGATAATGATGATAAAGGAGATACAGAGTCTGTGGTATCCGAGTCCCGTGTTCCGGTAGGAAAGTACCATGTAAAAGAAAGTTTTGCTTCCATCTTGGAATCTATCCTTGACAAGTATGGAGACATAGGAGCGAGCTGTCATTTGGAATCACTTGTCTTGCGCTCATACTACATTGAGTGTGTTTGCTTTGTGGTCCAAGAGTTACAATCAGACTCAATAATGCACTTAACTAAGTCCAAAATCAATGAACTAGTGGCCATTCTGAAGGATGTTGAGTCTGCTCAACTTCGCGTGGCGTGGTTGCGTAGCGCACTGGATGAAATAGCTGAAAATGTTGAAGTGATTAACCAGCACCAGGAGGTGGATGCTGCAAAGGCCAACACTGATCGCGAAATGGAATCACTGAGGGAACAGCTAGAATCAGAAATGGAAAGTTTGGCTGAGAAAGAACAAGAGGTTGCTGATATTAAAAAACGAATTCCAGAGATAAGCGATCGGTTGAAGGAGCTAGAGCTAAAGTCTGCTGAACTGGAGCAAAGCATGCTGTCTAGCAAGTCTGAGGTTGAAAATTTGCATCGCAAATCCTTGATAGATGAGCTGTTGTAA 1287 0.4429 MMAASNGTASNPNCPHASNPYHQCTQACSKKTSHRTKPHAKNTSSSGYQRSATDGEPGSKNTNRTHSGCPKASNPYHHCDHNCLTASGAAPPPSNFDRRKKPGSRPEPPVVAGAVPAAKVEAIQKSNASSPISNHSEIKKVESRNDDHNHSVPVSGQIHVPLPVPDVKHVHEEDQQKNGVEHLANPIQTKQEDKTASDVHPGEGLATTFKGGSIDFSFSGIIPQGNEDNDDKGDTESVVSESRVPVGKYHVKESFASILESILDKYGDIGASCHLESLVLRSYYIECVCFVVQELQSDSIMHLTKSKINELVAILKDVESAQLRVAWLRSALDEIAENVEVINQHQEVDAAKANTDREMESLREQLESEMESLAEKEQEVADIKKRIPEISDRLKELELKSAELEQSMLSSKSEVENLHRKSLIDELL* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2390 428 Pfam Arabidopsis phospholipase-like protein (PEARLI 4) 224 425 IPR007942 -
Lja1g2390 428 MobiDBLite consensus disorder prediction 39 69 - -
Lja1g2390 428 MobiDBLite consensus disorder prediction 220 239 - -
Lja1g2390 428 MobiDBLite consensus disorder prediction 27 69 - -
Lja1g2390 428 PANTHER OS06G0711100 PROTEIN 10 428 - -
Lja1g2390 428 Coils Coil 345 414 - -
Lja1g2390 428 PANTHER BNAA07G03350D PROTEIN 10 428 - -
Lja1g2390 428 MobiDBLite consensus disorder prediction 86 111 - -
Lja1g2390 428 MobiDBLite consensus disorder prediction 408 428 - -
Lja1g2390 428 MobiDBLite consensus disorder prediction 414 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2390 Lja-Chr1 27597162 27600162 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2390 - - lja:Lj1g3v3330510.3 642.884