Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2388 ATGGCTGATCCACAACCGTTGTTGCTCAACGAGCCAACTCAGCTTCAACAACCACCCCGAATCGCCTCCCTTGACGTCTTCCGTGGCCTCTCCGTTTTTCTCATGATATTGGTCGATTATGGTGCCTCCATCTTCCCCATCATTTCTCACGCCCCTTGGAATGGTATTCATTTAGCTGATCTCGTCATGCCATTCTTTCTATTTATTGCTGGAATCTCTCTCTCGCTTGTTTATAAGAGAAGGCCCAGCAGAACACAAGTTACATGGAAAGCCTTAGTTAAAGCTGCCAAACTCTTTATACTTGGTATTGCTCTTCAAGGTGGTTATTTTCATGGGATAACTTCCTTGACTTATGGTGTTGACATTGAAACAATTCGATGGCTCGGCATTTTACAGAGGATATCTATTGGATACATTGTTGCTGCTCTATGTGAGATCTGGCTTCCAGTCCTTAGATGGAAAGAATCAGGTTTCTTCAGAAGTTATTACTTGCATTGGTTTTTAGCAGTGATATTGTTGGGGATTTACTCGGCACTACTGTATGGTCTATATGTTCCGGATTGGCAGTTCCATGTATCAGCATCGACCTCTTTGTTGCCTCCAACAGATGGTGGCAAGGTTTACACGGTGAATTGTTCAGTGAGAGGTGATCTTGGACCTGCCTGTAACTCTGCTGGAATGATTGATCGCTATATTCTTCGTCTTGACCATCTGTACAGAAAGCCTGTTTACAGAAATCTCAAGGAGTGTAATATATCTGGCAAGGGTCACGTTCCAGATAGTTCACCATCTTGGTGCCATGCTCCTTTTGATCCAGAAGGCATTTTAAGCTCCATAACAGCCGCAGTTTCGTGCATAATTGGACTTCAATATGGTCATGTGCTTGCGCATCTAGAGGACCACAAGGGACGCCTAAACAACTGGCTGTGTTTTTCAGCTTCATTTTTAATCCTTGGATTGTTCATGGCATTAATAGGAATTCCTCTAAATAAGTCACTGTACACAGTCAGTTATATGCTGGTTACTTCGGCAGGCTCTGGTTTCACATTCATTGCTCTATATGTTCTGGTAGATGTTTACGGCCACAGGTGTTTCACAAGTGTATTGGAGTGGATGGGAAAGCACTCGTTGAGTATATTTGTCCTTGTATCTTCAAACTTAGCTGTGATTTCTATCCAAGGATTTTATTGGCGTAAACCAGAAAACAACATTATACACTGGATTGTGAGACGTTTTGACCACAGATAA 1248 0.4263 MADPQPLLLNEPTQLQQPPRIASLDVFRGLSVFLMILVDYGASIFPIISHAPWNGIHLADLVMPFFLFIAGISLSLVYKRRPSRTQVTWKALVKAAKLFILGIALQGGYFHGITSLTYGVDIETIRWLGILQRISIGYIVAALCEIWLPVLRWKESGFFRSYYLHWFLAVILLGIYSALLYGLYVPDWQFHVSASTSLLPPTDGGKVYTVNCSVRGDLGPACNSAGMIDRYILRLDHLYRKPVYRNLKECNISGKGHVPDSSPSWCHAPFDPEGILSSITAAVSCIIGLQYGHVLAHLEDHKGRLNNWLCFSASFLILGLFMALIGIPLNKSLYTVSYMLVTSAGSGFTFIALYVLVDVYGHRCFTSVLEWMGKHSLSIFVLVSSNLAVISIQGFYWRKPENNIIHWIVRRFDHR* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2388 415 PANTHER LD22376P 5 408 - -
Lja1g2388 415 Pfam Heparan-alpha-glucosaminide N-acetyltransferase, catalytic 20 153 IPR012429 -
Lja1g2388 415 PANTHER HEPARAN-ALPHA-GLUCOSAMINIDE N-ACETYLTRANSFERASE-LIKE ISOFORM X1 5 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2388 Lja-Chr1 27587932 27592843 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2388 - K10532 gmx:114255746 712.605