Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2387 ATGGATAGGCTTCTATCATCTTCTTCACCTCCTTCTCTCAAAACCCTCAACCTCAAGCCTTTTCCATTTCTCAATCGATCTCAATCTGCCAGATTCAATTTCTTCCCATCAACACGTTCTTACCTCAAGCGTGGCACCTCAATTTGTTGCAACCACCAAAACCCTTCTCCATTTTCCTCTTCTAGTCCCATTCTCGCATCCAAACAGCCCAATAATCTTCCATCTCTCTCGTTTTCTCCTGATAGGTCCTCACCCGAACCCAATTCTCTCACTCAGATCTCAACTGGAACTGGAACTGGAACTGGGGCTTCCCAAAAACCAAAGGCACTAACAGCTCGGACACTTGTAATACTCTCTGCTCTTGTCACGATCTTAATCCAACCAGCTATTGCCCCAGCAGCTTTTGCAACATTTCAAACTGCTGCCAATGCCGGAGGTGCAGTTGGTGGAAAACTAATCCGCACTGAGCTCCTAAGCAGTGCTTGGACTGGCTTCTTTGCTGGTTGCTTGCACACCTTATCAGGGCCTGACCACCTTGCCGCTTTGGCTCCATTATCAATTGGTCGCACCCGAATGGAGAGTGCTGCTGTGGGAGCCCTTTGGGGTTGTGGCCATGATGCTGGTCAGGTCATATTTGGCTTAATATTTTTAATCCTGAAGGATCGACTTCACATTGAAATTATTCGAACTTGGGGCACTAGAGTGGTGGGCTTTACCCTGCTAGTAATTGGTGCTATGGGAATTAGAGAAGCTTCAGAAGCGGCTGCACCCTCTGTTGCCTTAGAAAATGGTGAAGGTGATGTAAACGTCTATGAATCACTTGATAATCCAAAAACACGAAAGAAGAAGATTGGTTTTGCTACTTTTGCCACCGGGATAGTTCATGGTTTGCAACCAGATGCATTGATGATGGTGTTGCCTGCCCTTGCTTTGCCTTCTCGTTTGGCTGGTGCTGCATTTCTCATCATGTTCTTATTTGGAACTGTAATTGCAATGGGAAGCTATACAGTATTCATAGGGTCATGTAGCGAGGCCCTTAAGGATAAAGTACCTAGGATAACTGAGAAACTCACTTGGGCATCTTCTCTTATTGCTATAGCCCTTGGATTTGCGATCATTATTAGCCAGTTTTTTGGGTTTAGTCTGTATTAG 1152 0.4549 MDRLLSSSSPPSLKTLNLKPFPFLNRSQSARFNFFPSTRSYLKRGTSICCNHQNPSPFSSSSPILASKQPNNLPSLSFSPDRSSPEPNSLTQISTGTGTGTGASQKPKALTARTLVILSALVTILIQPAIAPAAFATFQTAANAGGAVGGKLIRTELLSSAWTGFFAGCLHTLSGPDHLAALAPLSIGRTRMESAAVGALWGCGHDAGQVIFGLIFLILKDRLHIEIIRTWGTRVVGFTLLVIGAMGIREASEAAAPSVALENGEGDVNVYESLDNPKTRKKKIGFATFATGIVHGLQPDALMMVLPALALPSRLAGAAFLIMFLFGTVIAMGSYTVFIGSCSEALKDKVPRITEKLTWASSLIAIALGFAIIISQFFGFSLY* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2387 383 PANTHER UNNAMED PRODUCT 1 383 - -
Lja1g2387 383 Pfam Cytochrome C biogenesis protein transmembrane region 211 355 IPR039447 -
Lja1g2387 383 MobiDBLite consensus disorder prediction 75 105 - -
Lja1g2387 383 PANTHER EXPRESSED PROTEIN 1 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2387 Lja-Chr1 27582612 27584932 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2387 - - gmx:100818218 513.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2387 1 27582612 27584932 Lja1g2387 1 27582612 27584932 ECH