Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2371 ATGGGATCTCAAGTCTCTAAACAGGTTGAAAGAAGAAAGACAATCCATACCCAGAAGAAAACTCTATATGATCTCAAAAGCTCAGGGGAAGACTACCCTGGCTCTGAATACCACCCCACAGACAGGAAAAACTGGATGAGTGGTCTCAACCCAGAGAAACTTCACATCAACCAGATTGTTTGGCCTGGAACACATGATTCTGCAACAAACAAGATTGGTATCCCACTCGTCACTCGCCCTTTTGCTCAATGTCAATCACTCTCCATCTACAACCAGCTTGTGAAGGGTACCCGTGTTCTCGACATTCGGGTGGAGGAGAATCGCCGTGTGTGCCACGGTATCCTCGTTACTTACAGTGTTGATGTTGTGATCAATGATGTCAAGAAGTTTCTGTCAGAAACAGAGCATGAGATCATAATCCTTGAGATCAGAACAGAGTTTGGCCATGAGGATCCACCTGAATTCTCCAAGTACTTGGAGGAAAATTTGGGTGAGTACTTGATTTCCCAGGATGATCATGTTTTTGGCAAGACCATCACTGAGGTGTTACCCAAGAGAGTTATATGCGTTTGGAAGCCGAGAAAATCTCCACAGCCTAAAACAGGGGATCCCCTGTGGAGTGCAGGGTATCTGAAGGATAATTGGATCAACACTGATCTGCCATCAACCAAGTTCGATGGAAATTTGAAGCATTTGGGCGAGCATCCACCGGTTTCGGCGAGGAAATACTTCTACAGGGTGGAGAACACGGTGACTCCGGTGGCGGATAACCCTGTTCTGTGTGTGAAACCTGTCACCAGACGCATTCATGGGTATGCTAGGCTCTTCATTGCTCAGTGCTTCGCTAACGGCTGCGCTGATAAGCTTCAGGTTTTGTCCACTGATTTCATTGACGAGGATTTTGTTGATGCTTGTGTTGGACTCACCCATGCAAGAATTGAAGGAAAAGTCTGA 954 0.4633 MGSQVSKQVERRKTIHTQKKTLYDLKSSGEDYPGSEYHPTDRKNWMSGLNPEKLHINQIVWPGTHDSATNKIGIPLVTRPFAQCQSLSIYNQLVKGTRVLDIRVEENRRVCHGILVTYSVDVVINDVKKFLSETEHEIIILEIRTEFGHEDPPEFSKYLEENLGEYLISQDDHVFGKTITEVLPKRVICVWKPRKSPQPKTGDPLWSAGYLKDNWINTDLPSTKFDGNLKHLGEHPPVSARKYFYRVENTVTPVADNPVLCVKPVTRRIHGYARLFIAQCFANGCADKLQVLSTDFIDEDFVDACVGLTHARIEGKV* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2371 317 PANTHER UNCHARACTERIZED 7 314 - -
Lja1g2371 317 MobiDBLite consensus disorder prediction 1 20 - -
Lja1g2371 317 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 56 184 - -
Lja1g2371 317 Pfam Phosphatidylinositol-specific phospholipase C, X domain 74 173 IPR000909 -
Lja1g2371 317 SUPERFAMILY PLC-like phosphodiesterases 41 308 IPR017946 GO:0006629|GO:0008081
Lja1g2371 317 PANTHER 1-PHOSPHATIDYLINOSITOL PHOSPHODIESTERASE-LIKE PROTEIN 7 314 - -
Lja1g2371 317 SMART plcx_3 50 192 IPR000909 -
Lja1g2371 317 CDD PI-PLCXDc_plant 32 312 - -
Lja1g2371 317 Gene3D Phosphatidylinositol (PI) phosphodiesterase 41 309 IPR017946 GO:0006629|GO:0008081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2371 Lja-Chr1 27397390 27398757 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2371 1 317 Acyl Lipid Metabolism Gene Families AT4G38690 75.786 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2371 - - lja:Lj3g3v3500050.1 566.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2371 1 27397390 27398757 Lja1g2371 1 27397390 27398757 ECH