Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2366 ATGTCGTCGTCTTCCTTTCCGGTGGATTGGTCTCATCAAAATGGAAATTCTAGGAATCCAGAAGACACACTATGTTCTGTGGCAGAAGTTGAGGAGTTTGATTTCTCCAAAGCATTAGATAAGCCAAGGCTTTTGAATATAGAGAGACAGAGGTCATGTGATGAAAGATCAATGAGTGAACTATCCATAGGCTTTTCTCCGCGTCAATTGTCCACTAAACCTGACAACTATTATCGCCTTCCCGACCATCTTGACAACTCATTTTTTCTTCTGCCAAAATCAGGTCTTAATACTCCAAGATCACTCATATTGGATCCACATCCATTGATAGTGTCTGAAGCTTGGGAAGCTCTCAGGCGTTCCTTAGTATATTTTCGCGGTCAGCCAGTTGGGACAATTGCTGCCTTGGATAATTCTGATGAGAAGCTTAATTATGATCAGGTGTTTATAAGAGACTTTGTGCCGAGTGCTTTGGCTTTTCTGATGCATGGGGAACCAGATATTGTTAAAAACTTTATTCTAAAGACCCTTCGCCTTCAATCATGGGAGAAAAAGATTGACAGGTTCCATCTAGCGGAAGGGGTAATGCCTGCTAGTTTTAAAGTATACCATGATCCAGTCAGAAACCATGAAACCCTGATAGCAGATTTTGGTGAAAGTGCAATAGGAAGGGTTGCTCCTGTTGATTCTGGATTTTGGTGGATTATCTTACTCCGTGCATACACAAAGTCTACAGGAGACTCTTCTTTGGCTGAACGGCCTGAGTGTCAAAAGGGTATGCGCTTGATTCTAAGTTTATGCCTGTCAGAGGGGTTTGACACATTTCCAACGTTACTATGCGCTGATGGATGTTGTATGATTGATCGTAGAATGGGTGTTTATGGGTATCCAATAGAAATTCAAGCATTGTTCTTCATGGCTTTAAGATGTGCGTTGCAATTGCTTAAGCCAGATGCTGAAGGGAAAGAGTTCATGGAACGGATTGTCAAACGCTTGCATGCCTTGAGCTACCATATGAGAAGCTACTTTTGGTTGGATTTGAAGCAACTCAATGATGTTTATCGCTTCAAAACAGAAGAGTACTCACATACTGCAGTCAACAAGTTTAATGTCATTCCTGATTCTTTACCAGATTGGGTTTTTGATTTCATGCCTCATCATGGTGGATACTTTGTAGGGAATGTCAGCCCTGCTAGGATGGATTTCCGCTGGTTTTGTCTGGGCAATTGCATTGCAATTCTGTCTTCCTTGGCAACTCCTGAGCAGTCAGTTGCAATCATGGACCTAATAGAATCACGGTGGGAAGAGTTAATTGGGGACATGCCTGTCAAAGTTTGTTATCCAGCCATTGAAAGCCATGAATGGAGGATCGTAACAGGATGTGACCCTAAAAATACTAGATGGAGTTACCACAATGGTGGATCTTGGCCAGTTCTTTTATGGCTTCTGTCTGCGGCCTCCATCAAGACGGGACGGCCCCAAATTGCAAGACGTGCCCTTCACATTGCTGAGACCAGATTGGTAAAGGACAATTGGCCTGAATATTATGATGGAACTCTTGGTCGATACGTTGGGAAGCAGGCGCGTAAATTCCAAACATGGTCTATTGCTGGTTACCTGGTGGCTAGGATGATGCTGGATGATCCATCACATTTAGGTATTGTAGCACTGGAAGATGACAAACAGCTAAAGCCTTTACTCAAGAGATCAAATTCATGGACTTTGTGA 1728 0.4282 MSSSSFPVDWSHQNGNSRNPEDTLCSVAEVEEFDFSKALDKPRLLNIERQRSCDERSMSELSIGFSPRQLSTKPDNYYRLPDHLDNSFFLLPKSGLNTPRSLILDPHPLIVSEAWEALRRSLVYFRGQPVGTIAALDNSDEKLNYDQVFIRDFVPSALAFLMHGEPDIVKNFILKTLRLQSWEKKIDRFHLAEGVMPASFKVYHDPVRNHETLIADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDSSLAERPECQKGMRLILSLCLSEGFDTFPTLLCADGCCMIDRRMGVYGYPIEIQALFFMALRCALQLLKPDAEGKEFMERIVKRLHALSYHMRSYFWLDLKQLNDVYRFKTEEYSHTAVNKFNVIPDSLPDWVFDFMPHHGGYFVGNVSPARMDFRWFCLGNCIAILSSLATPEQSVAIMDLIESRWEELIGDMPVKVCYPAIESHEWRIVTGCDPKNTRWSYHNGGSWPVLLWLLSAASIKTGRPQIARRALHIAETRLVKDNWPEYYDGTLGRYVGKQARKFQTWSIAGYLVARMMLDDPSHLGIVALEDDKQLKPLLKRSNSWTL* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2366 575 Pfam Alkaline and neutral invertase 114 549 IPR024746 GO:0033926
Lja1g2366 575 Gene3D - 141 544 IPR012341 GO:0005975
Lja1g2366 575 SUPERFAMILY Six-hairpin glycosidases 114 542 IPR008928 GO:0005975
Lja1g2366 575 MobiDBLite consensus disorder prediction 1 23 - -
Lja1g2366 575 PANTHER ALKALINE/NEUTRAL INVERTASE B-RELATED 14 574 - -
Lja1g2366 575 PANTHER - 14 574 IPR024746 GO:0033926
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2366 Lja-Chr1 27352493 27355706 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2366 - - lja:Lj1g3v3343910.1 1190.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2366 1 27352493 27355706 Lja1g2366 1 27352493 27355706 ECH