Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2362 ATGGAGAGTGGTTCAGGCAACCCCAAGAGAAAAAGTGGTGAGGTTCTGGATGGTTCCAACATTATGGAGTTGGTTGGGAACGAGCAAGTGTTCAACAATTTTGTGGACCATAAGTTTCATCAGCTCGATAAGGACAAAGACGGCAAACTCTCTGTGAAGGAGCTCGAACCTGCTGTTGCTGATATCGGTGCTGCTCTTGGTTTGCCTGCTCAGGGCACTAGTCCTGATTCTGATCACATCTATTATGAGGTCTTGAATGAATTCACCCATGGAAAGCAAGAAAAAGTGAGCAAAACTGAATTTAAAGAGGTTCTTTCAGACATTTTATTGGGTATGGCTGCTGGACTGAAGCGAGACCCCATTGTTATACTCCGCATGGATGGAGAAGATCTCCTTGAGTTTGTTGATGGTCCAAGTTATGAACCAGAAATGGTATCCTTGTTCTCTGAGATTGATAACCCTACTGAATCACTTCGTGAACATATAATTAAAGCTCTTAAGAGACTCGCTGTTGATCGAGGAGTTCCTCCTACTTCAGATTCTTGGGTTTTTAACAACATTGTGGATCCGGCACTGGTGTCTCAAGCAGGGCCTGCTTGGGATAAGCCTGTCACTCAGGAGACATTTTTGGAAGAATTCAAGAAAGTGGCATTGAGTGTGGTTAATTGTCTTAAAGAGAAACCTGTCATTGTTGCCCACAGTGAAAACACCTTTGATGGAAGTGGCGTCAAGAGACTTTTATCAAACAAGTTTGAATTAGACAAGACACTGAACTCAGCTTTAGAGAATCTGCCAAAAGATCGAAATGGAAAATTATCAAAGGACTATTTGCGTGTGGCACTGGATGTGGTGTCTCCATCTGCTGGTTTACCTCCAGTTGGTGCAATTGAAGAGATGGATAAGGTTATTAGTGAAGCCTGTAAGATGGTGAATGCCGATGATACGAAGACGGTTAAAGAAGACGAATTCAAGAAAGTTTTAACTGAAATTCTGGGGAGTATCATGCTGCAGTTAGGGGGAAATCCCATATCTGTTAATTCAAATTCAGTTGTGCATGAGCCTTTAGGCTCATCTTCTTCACTTTTGCAGCCATCTAGTGAAACAGCATGA 1110 0.4252 MESGSGNPKRKSGEVLDGSNIMELVGNEQVFNNFVDHKFHQLDKDKDGKLSVKELEPAVADIGAALGLPAQGTSPDSDHIYYEVLNEFTHGKQEKVSKTEFKEVLSDILLGMAAGLKRDPIVILRMDGEDLLEFVDGPSYEPEMVSLFSEIDNPTESLREHIIKALKRLAVDRGVPPTSDSWVFNNIVDPALVSQAGPAWDKPVTQETFLEEFKKVALSVVNCLKEKPVIVAHSENTFDGSGVKRLLSNKFELDKTLNSALENLPKDRNGKLSKDYLRVALDVVSPSAGLPPVGAIEEMDKVISEACKMVNADDTKTVKEDEFKKVLTEILGSIMLQLGGNPISVNSNSVVHEPLGSSSSLLQPSSETA* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2362 369 SUPERFAMILY EF-hand 38 341 IPR011992 -
Lja1g2362 369 PANTHER CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED 1 367 - -
Lja1g2362 369 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 1 367 - -
Lja1g2362 369 Pfam EF-hand domain pair 38 104 IPR002048 GO:0005509
Lja1g2362 369 ProSitePatterns EF-hand calcium-binding domain. 43 55 IPR018247 -
Lja1g2362 369 Gene3D - 33 335 - -
Lja1g2362 369 ProSiteProfiles EF-hand calcium-binding domain profile. 30 65 IPR002048 GO:0005509
Lja1g2362 369 SMART efh_1 256 284 IPR002048 GO:0005509
Lja1g2362 369 SMART efh_1 302 330 IPR002048 GO:0005509
Lja1g2362 369 SMART efh_1 34 62 IPR002048 GO:0005509
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2362 7 368 EF-hand Containing Proteins AT4G38810 67.397 6.42e-175 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2362 - - gmx:100787083 585.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2362 1 27332655 27336768 Lja1g2362 1 27332655 27336768 ECH