Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2358 ATGGCTATTCGTCTGTCTAGTGCTTTGAGTGCTAAACGCATTCTCCGCGGATCTAGCCTTTTTGCAAATCAAGCAGCTGCTACATCACTGGATGTGCCTAAAGGGTACTTTGCTGTGTATGTAGGAGAGAGTGAAAAGAAGAGATTTGTCATACCAGTGTCATTGTTGAATCAGCCCTCATTTCAAGAACTGCTAAGTGCAGCGGAGGAAGAATTTGGCTTCAGTCATCCAATGGGTGGCCTCATAATTCCCTGCACAGAAGACATTTTTGTTGAAGTCGCCTCTGGCCTACACAGACTATGA 303 0.4521 MAIRLSSALSAKRILRGSSLFANQAAATSLDVPKGYFAVYVGESEKKRFVIPVSLLNQPSFQELLSAAEEEFGFSHPMGGLIIPCTEDIFVEVASGLHRL* 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2358 100 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY 1 97 - -
Lja1g2358 100 Pfam Auxin responsive protein 11 94 IPR003676 GO:0009733
Lja1g2358 100 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 97 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2358 Lja-Chr1 27278224 27278913 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2358 24 90 Calmodulin-binding Proteins AT3G43120 50.746 1.50e-15 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2358 K14488 - aprc:113865304 172.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2358 1 27278224 27278913 Lja1g2358 1 27278224 27278913 ECH