Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2354 ATGACGACACACCTGCTTCACCTGCCGCTCATACCACCGCCATCACCGTCACCTTGGCGGCGTCACCACCACACATCCGCCGCAACCACCACAATTACTCCGCCGCGGACCGGGTGGGTCCAGCTACAGTCACAGTTAGGCAAGGCGGTTATTGGTTCGACAAGGAGGAGCATAAGGTGCATGGCGAATCCTCGGAGAGTGAAAATGGTGGCGAAGCAAATACAGAGGGAGCTTTCTGACATGCTCCTCACCGATAAAGTCTTGCAGTTCGCCGTTCTTCCTGAAGCTTCCTTAGGAGCTGACCGTTACCTCTCTTCCCTCACCACCATCACCGACGTCCAAGTCTCCGCCGATTTGCAGGTTGTTAAGGTGTATGTATCTGTTTTTGGAGATGAAAGAGGGAAGGAAGTAGCCATTGCTGGGTTGAAATCAAATGCTAAGTATGTTCGAAGTGAGTTGGGGAAGCGTATTAAGCTGCGATTAACCCCTGAGGTTCGCTTTATGGAGGACGAGTCTTTTGAAAGAGGAAGCAGGGTGATTGCAATATTAGATAAGATAAAAAATGAAAAGGTCTCTGAGGGTCAAACTAAGGAGCAGTTGGATTCATCAGCCCAAGAAGACGACGACGACAGTTGGGGTGGTGAAGACCCTGATGAAGGTATAATTTATGTGGAGTAG 678 0.5 MTTHLLHLPLIPPPSPSPWRRHHHTSAATTTITPPRTGWVQLQSQLGKAVIGSTRRSIRCMANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEASLGADRYLSSLTTITDVQVSADLQVVKVYVSVFGDERGKEVAIAGLKSNAKYVRSELGKRIKLRLTPEVRFMEDESFERGSRVIAILDKIKNEKVSEGQTKEQLDSSAQEDDDDSWGGEDPDEGIIYVE* 226
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2354 225 Pfam Ribosome-binding factor A 66 182 IPR000238 GO:0006364
Lja1g2354 225 PANTHER RIBOSOME-BINDING FACTOR A, CHLOROPLASTIC-RELATED 52 225 IPR000238 GO:0006364
Lja1g2354 225 Hamap Ribosome-binding factor A [rbfA]. 65 183 IPR000238 GO:0006364
Lja1g2354 225 ProSitePatterns Ribosome-binding factor A signature. 149 170 IPR020053 GO:0006364
Lja1g2354 225 Gene3D - 61 177 IPR015946 -
Lja1g2354 225 MobiDBLite consensus disorder prediction 1 32 - -
Lja1g2354 225 MobiDBLite consensus disorder prediction 191 225 - -
Lja1g2354 225 SUPERFAMILY Ribosome-binding factor A, RbfA 61 186 IPR023799 -
Lja1g2354 225 TIGRFAM rbfA: ribosome-binding factor A 61 188 IPR000238 GO:0006364
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2354 K02834 - gmx:100812407 285.804
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2354 1 27250883 27253130 Lja1g2354 1 27250883 27253130 ECH