Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2332 ATGGCGCTGTTGAATCGCGTTTGTCGTCTGAGTCCCAATCACCGCCACCTCTGCTTCGCCAAGTGCCACGACATCGTTTCTTCCATTCCTTCCACCACCACGCATCGTATCAGCAGCGTTTCCCATGCCGTGGCTTCCACCGGAAAGCGCGCGTTCCTCGTTGATACACTTGGCTTGGTTAGGGGTTTAGAGGCAAATGGGGTGCCGCCTAAACAGGCTGAAGCGATAACTTCTGCCATCACTGAAGTTCTCAATGATAGCTTGGAAAATGTAGCTCATTCTTTTGTTACAAAATCAGAATTGCAAAAGTCAGAGATGCTCCAAGAATCAAATCTGTCAAAGTTCAAATCTGAAGTGCAAAGTTCTCAGGAGCATCATTTTTCTTTGTTACAAGGCCAGACACAAAAGCTTCATAATGACATAGAGAAGATGAGAACTGAATTAAGGCATGAGATTGACAAAGTCACTGCAGGGCAACGTTTGGACTTGAATCTTGAAAGAGCACGCATACGGGATGAGCTTGCTAATCAAAATGCTGAAACCACCGCGCTGACAAACAAACTTGATCGGGAAATCCATGCATTAAGAGCCCAGTTAGAAGCTGCAAAGTATGATGTGATCAAATACTGCATAGGTACCCTTGTCTCCATATCTGCAGTGGGTCTCGCTGTAATCCGTATCATATTGTAG 690 0.4551 MALLNRVCRLSPNHRHLCFAKCHDIVSSIPSTTTHRISSVSHAVASTGKRAFLVDTLGLVRGLEANGVPPKQAEAITSAITEVLNDSLENVAHSFVTKSELQKSEMLQESNLSKFKSEVQSSQEHHFSLLQGQTQKLHNDIEKMRTELRHEIDKVTAGQRLDLNLERARIRDELANQNAETTALTNKLDREIHALRAQLEAAKYDVIKYCIGTLVSISAVGLAVIRIIL* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2332 229 PANTHER - 38 228 - -
Lja1g2332 229 Gene3D - 55 157 - -
Lja1g2332 229 Coils Coil 160 180 - -
Lja1g2332 229 Coils Coil 185 205 - -
Lja1g2332 229 Pfam Coiled-coil domain-containing protein 90-like 54 227 IPR024461 -
Lja1g2332 229 PANTHER UNCHARACTERIZED 38 228 IPR024461 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2332 Lja-Chr1 27011205 27014957 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2332 - - rcu:8284365 315.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2332 1 27011205 27014957 Lja1g2332 1 27011205 27014957 ECH