Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2327 ATGGCAGAGGAGAACCAGAACAAGTATGAGAGTGGTACCACTGAGGTGGAGACCCAGGACAGGGGTGTCTTTGATTTTCTTGGTAAGAAGAAGGAGGAAGAGAAGCCTCAAGAGGAGGTGATAGTCACCGAGTTTGAGAAGGTCAAAGTGTCTGAGGAACCTGAGAAGAAGAAAGAAGAGGTTGATCATGAAGGAGAGAAGAAGCACAGCACCCTCTTGGAGAAGCTTCACCGATCTGACAGCAGCTCTAGCTCTTCAAGCGATGAGGAAGAAGGAAAAGAGGGAGAGGAGAAGAAGAAAAAGAAGAAGAAGGAAAAGAAAGAGGTGAAGAGTACAGATGAGAACACGAGTGTTCCGGTTGAGGTTGATCCTGCACACGCTGAGGAAAAGAAGGGGTTCCTTGACAAAATCAAGGAGAAGCTACCAGGGCATGGTAAGAAGACTACAGAGGAAGCCACCACTTCTCCACCACCACCACCACCATCTGTTTCAGAGACGACAAGTACTCCTCATGAAGGAGCTGAGAAGAAAGGTATCTTAGAGAAGATCAAAGAGAAGATTCCAGGATATCATCCAAAGACTGAGGAGGAAGGCACCAAGGATAAGGAGAATGCTGCTCATTGA 624 0.4712 MAEENQNKYESGTTEVETQDRGVFDFLGKKKEEEKPQEEVIVTEFEKVKVSEEPEKKKEEVDHEGEKKHSTLLEKLHRSDSSSSSSSDEEEGKEGEEKKKKKKKEKKEVKSTDENTSVPVEVDPAHAEEKKGFLDKIKEKLPGHGKKTTEEATTSPPPPPPSVSETTSTPHEGAEKKGILEKIKEKIPGYHPKTEEEGTKDKENAAH* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2327 207 Pfam Dehydrin 130 191 IPR000167 GO:0009415
Lja1g2327 207 Pfam Dehydrin 58 145 IPR000167 GO:0009415
Lja1g2327 207 ProSitePatterns Dehydrins signature 1. 83 103 IPR030513 -
Lja1g2327 207 PANTHER DEHYDRIN ERD14 1 200 - -
Lja1g2327 207 MobiDBLite consensus disorder prediction 170 207 - -
Lja1g2327 207 MobiDBLite consensus disorder prediction 1 207 - -
Lja1g2327 207 MobiDBLite consensus disorder prediction 123 147 - -
Lja1g2327 207 MobiDBLite consensus disorder prediction 22 114 - -
Lja1g2327 207 PANTHER DEHYDRIN XERO 2-RELATED 1 200 IPR000167 GO:0009415
Lja1g2327 207 ProSitePatterns Dehydrins signature 2. 182 189 IPR030513 -
Lja1g2327 207 MobiDBLite consensus disorder prediction 1 18 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2327 - - vun:114163229 154.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2327 1 26936915 26938340 Lja1g2327 1 26936915 26938340 ECH