Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2324 ATGTCGTCGTGGCAGTGCCATCATCTTATTTCCCAAACTGCCCCTGCCAGACTCCCATTCACAACCAGAGCCATGGCGGCGCCTCACCCTCACCCTCAGGTTCTGCAACTCGCCGACGTCGCTAACAAAGCCGCCGACGCCGCCGGACAAGTCATCCGTAAATATTTCCGGAATAAATTTGAAATTCTTCAAAAACATGATCTCAGTCCAGTAACCATTGCAGATCAATCAGCTGAGGAAGCTATGGTTTCAATCATACTTGACAATTTCCCTTCTCATGCTATTTATGGAGAGGAAAAAGGGTGGAGGTGTAAAGAAGACAGTGCTGATTATGTTTGGGTATTGGATCCCATTGATGGGACAAAGAGCTTTATCACTGGGAAGCCCCTATTTGGTACTCTTATAGCTCTTTTACAAAATGGGACACCAATACTTGGCATAATTGATCAGCCTGTGTTAAGAGAAAGGTGGATTGGGATAACTGGAAAGAGAACTACACTGAACGGACAAGAGGTGTCCACACGCACTTGTGCTGACCTTTCTCAAGCATACTTGTACACCACAAGCCCACATCTGTTCAGTGGAGATGCAGAAGAGGCATTCATTCGTGTTAGAGACAAGGTTAAAATTCCATTGTATGGCTGTGACTGCTATGCATATGCTCTTTTGTCTTCTGGCTTTGTGGATCTTGTTGTTGAGTCTGGTCTGAAGCCATACGATTTCCTGGCATTGATACCTGTTATTGAAGGCGCCGGAGGTGTTATAACTGATTGGAAAGGACACCAACTTCATTGGGAAGCTTCTCCACTTTCAATCGCAACAAATTTTAATGTTGTGGCAGCTGGCGACAAACAGATTCATCAACAGGCTCTAGATTTATTACAGTGGAAGTGA 894 0.4497 MSSWQCHHLISQTAPARLPFTTRAMAAPHPHPQVLQLADVANKAADAAGQVIRKYFRNKFEILQKHDLSPVTIADQSAEEAMVSIILDNFPSHAIYGEEKGWRCKEDSADYVWVLDPIDGTKSFITGKPLFGTLIALLQNGTPILGIIDQPVLRERWIGITGKRTTLNGQEVSTRTCADLSQAYLYTTSPHLFSGDAEEAFIRVRDKVKIPLYGCDCYAYALLSSGFVDLVVESGLKPYDFLALIPVIEGAGGVITDWKGHQLHWEASPLSIATNFNVVAAGDKQIHQQALDLLQWK* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2324 297 PANTHER PHOSPHATASE 35 295 - -
Lja1g2324 297 CDD Bacterial_IMPase_like_1 38 291 - -
Lja1g2324 297 Gene3D - 173 296 - -
Lja1g2324 297 PANTHER 3'(2'),5'-BISPHOSPHATE NUCLEOTIDASE 35 295 - -
Lja1g2324 297 Gene3D - 25 172 - -
Lja1g2324 297 ProSitePatterns Inositol monophosphatase family signature 1. 113 126 IPR020583 -
Lja1g2324 297 TIGRFAM his_9_HisN: histidinol-phosphatase 39 295 IPR011809 GO:0004401
Lja1g2324 297 PRINTS Inositol monophosphatase superfamily signature 69 89 IPR000760 GO:0046855
Lja1g2324 297 PRINTS Inositol monophosphatase superfamily signature 236 260 IPR000760 GO:0046855
Lja1g2324 297 PRINTS Inositol monophosphatase superfamily signature 162 185 IPR000760 GO:0046855
Lja1g2324 297 PRINTS Inositol monophosphatase superfamily signature 91 107 IPR000760 GO:0046855
Lja1g2324 297 PRINTS Inositol monophosphatase superfamily signature 113 129 IPR000760 GO:0046855
Lja1g2324 297 Pfam Inositol monophosphatase family 37 287 IPR000760 GO:0046855
Lja1g2324 297 SUPERFAMILY Carbohydrate phosphatase 36 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2324 Lja-Chr1 26923315 26926615 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2324 K18649 - gmx:100527811 493.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2324 1 26923315 26926615 Lja1g2324 1 26923315 26926615 ECH