Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2313 ATGTCTCTTAAACCCGTAAAGAAAATGGGTTCTTCTAACTCCCACAAGCTCAAGACAGAGAAATCCAACAAGATCATGAAACATCGCAAGCTTCGAAAGATTGCGAACTTGTTGCGGTACGTTGAGATGTGTGTTGTTTTGGTCTTGATTTCCAGGGCCTCCTTCCAACACCTACCAGTGGCTCTCAAGATCTCAAGCGAGTATTTCAGTGGTTTCATGGTTAGCCCTCGCTTCGTTTTTCTGATCGGAAACGTTATAATCATCGCTCTGTTCGCCCAGTCTGGCCAATTCTCAGGAAAGACAACTCCAGAGCCTGATTTTTATCTCGAGTTCCTTCAGAATAGCACCGTGAATCAGGAAACTCAAGATGATCAGAAAAGGGTAAGCATGAAATCGGAGAACGGTGTAAAGGATCATCATCATAGAATCGATGGAGGCATGATTAAAACCAAACACCCAGAAAAACAGAGCACAGATGGAAGCATGATCAAACTCCCCGAAAAACAGAGCACGAGAGCAACAACAACTGGTTTGGAGATAGTGGAAGTGAAGGACTATAGAAGGTGTCAATCAGAGATTACGAGGCGTATGCAGAGTGATGAGAAGGATCGGCGCGTGCTGCAAAGGTGTGAGACTGAGAATCGGATGAGGAGAAGCAATGAAGGTGAAACAGAGAGAGTGGGAAGGAGTTCGTACCCTGAAGATGGAATGAGCAACGACGATTTTCGACGCACGGTGGAGGCTTTCATTGCGCGCCAACAGAGGCTCCGAGAACATGAATTACAAGCATTTTCTTCCTAA 801 0.4557 MSLKPVKKMGSSNSHKLKTEKSNKIMKHRKLRKIANLLRYVEMCVVLVLISRASFQHLPVALKISSEYFSGFMVSPRFVFLIGNVIIIALFAQSGQFSGKTTPEPDFYLEFLQNSTVNQETQDDQKRVSMKSENGVKDHHHRIDGGMIKTKHPEKQSTDGSMIKLPEKQSTRATTTGLEIVEVKDYRRCQSEITRRMQSDEKDRRVLQRCETENRMRRSNEGETERVGRSSYPEDGMSNDDFRRTVEAFIARQQRLREHELQAFSS* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2313 266 PANTHER TRANSMEMBRANE PROTEIN 10 261 - -
Lja1g2313 266 MobiDBLite consensus disorder prediction 124 143 - -
Lja1g2313 266 PANTHER PROTEIN, PUTATIVE-RELATED 10 261 - -
Lja1g2313 266 MobiDBLite consensus disorder prediction 120 143 - -
Lja1g2313 266 MobiDBLite consensus disorder prediction 212 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2313 Lja-Chr1 26795161 26796462 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2313 - - mtr:MTR_3g117050 246.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2313 1 26795161 26796462 Lja1g2313 1 26795161 26796462 ECH
Lja1g2313 1 26795161 26796462 Lja4g3205 4 60599520 60600358 ECH