Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2303 ATGCAATCTAGGCAAATAGCACACGTGTTGAATGTCTCAGACAATGCAAAGAACAGCACCAACTCGAGCCAAGACATCAATCATCACCATGTGCAAATTGATCCTGGCTCTGCCCTCCAACAATTTCTTGATCACATACCCATTAGTTCAATACCCTCCATAAAAGATTCACCAGTTTTGGAATTGAAAGCTGGAGACAGTATAAGAGATGCAATTCATATGTTGTATGAAAAGGACACATTTTTTGCTGCCATTGTGGATGTCTTAGACACTGAATCAGCCAGCTTAAGATTTTCAGATCAATATATGGGTTTTATAGATTTTGCAAGCATGGTTCTTTGGTGTCTTGAGGAATATGAAAAGATTAGTGAAAATGCCACGGAAAAGGATCTCAAGGACATAAAGAACAATGGTTTTTTCTCCATCCTGGACAAGGTTCCTCAGATTGGGCAGACCAAGGTTGGCGAGTTGGCTAAGTCATTTCTCTGGCAACCATTTTTCCCTGTACTCTTGGATGACACAATTTTGCATGCACTGCTACTTCTTTCTAAGCATCAATTGCATGTTTTGCCTGTCACACAACAACCTGGTCCTGGAATCATAGGTTTTGTTACACAGAATGATGTAGTCAAATTCCTCCTTCAATCAAGTGAACTAGAGTGGTTTGATTCTATTGCAGACAAGAACTTGTCAGATTTCAGATTTGAAGGCCAAGATCATCCTATTTGTGTATCAGGGGGTCAAACTGTTGCAGATGCATTTAAGTTGCTCAGGCAGAACCAGGCTTGTGCAATTGTAGTTGTAGATGGAAAAACTAAGAAGCTCCTTGGTAATTTGAGGAACAGTGACGTTTATAATCTTGTAAAGAATGATGACCTCTTTAGAAATAGAAAGACTTTAACTGTCCAAGAGTTCATTCACATAGAGACTGACAAATTAGACACTGGACCAACTACTGAACAAGATCACCGTGCTCTTCTCGCAGAAAGAAGTCTCAGCATGAAAAATAGCTTGATCTCCAGAATGGATTCACCGGCTACCAACAAGGAAAATGATACACTCAAGCAAGTAATGGAGCATATGACACAGACCAATAGCAGTTTCAGCTTTGTGATCAATGATACTAAACAAGTTACAGGTTTGCTCACACTGAGAGATATAATTCTGCAGTTTGCTCCCCCGGGTGTGAATTCTACCATTCATGGAGGAGGGTTTTTTGAGTTTGCTTTGGAGCAGAGTGGATGCCAAGTAAAAAATGGAACTATTATTCGTAATCGTTGA 1281 0.3997 MQSRQIAHVLNVSDNAKNSTNSSQDINHHHVQIDPGSALQQFLDHIPISSIPSIKDSPVLELKAGDSIRDAIHMLYEKDTFFAAIVDVLDTESASLRFSDQYMGFIDFASMVLWCLEEYEKISENATEKDLKDIKNNGFFSILDKVPQIGQTKVGELAKSFLWQPFFPVLLDDTILHALLLLSKHQLHVLPVTQQPGPGIIGFVTQNDVVKFLLQSSELEWFDSIADKNLSDFRFEGQDHPICVSGGQTVADAFKLLRQNQACAIVVVDGKTKKLLGNLRNSDVYNLVKNDDLFRNRKTLTVQEFIHIETDKLDTGPTTEQDHRALLAERSLSMKNSLISRMDSPATNKENDTLKQVMEHMTQTNSSFSFVINDTKQVTGLLTLRDIILQFAPPGVNSTIHGGGFFEFALEQSGCQVKNGTIIRNR* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2303 426 CDD CBS_pair_SF 239 388 - -
Lja1g2303 426 Gene3D - 27 219 IPR046342 -
Lja1g2303 426 ProSiteProfiles CBS domain profile. 339 399 IPR000644 -
Lja1g2303 426 CDD CBS_pair_SF 164 284 - -
Lja1g2303 426 SUPERFAMILY CBS-domain pair 34 215 IPR046342 -
Lja1g2303 426 ProSiteProfiles CBS domain profile. 162 219 IPR000644 -
Lja1g2303 426 SUPERFAMILY CBS-domain pair 239 389 IPR046342 -
Lja1g2303 426 Gene3D - 224 392 IPR046342 -
Lja1g2303 426 PANTHER OS01G0633400 PROTEIN 1 425 - -
Lja1g2303 426 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 1 425 - -
Lja1g2303 426 Pfam CBS domain 349 388 IPR000644 -
Lja1g2303 426 Pfam CBS domain 160 214 IPR000644 -
Lja1g2303 426 SMART cbs_1 165 214 IPR000644 -
Lja1g2303 426 SMART cbs_1 240 289 IPR000644 -
Lja1g2303 426 SMART cbs_1 344 392 IPR000644 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2303 - - gmx:100819351 584.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2303 1 26729162 26731713 Lja1g2303 1 26729162 26731713 ECH