Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2299 ATGCGACGCCGCACCACCTTCCTCCTCTCTCTACTCGCCATTCTCCTCTTCGCTACCTTTTCCCTTCACCTCTCTCGCAACGCCATCTCCACTTCGCAACCCTATTCCTACCTCCACAACGCCAACTTCAACACCAACGAAAACGTCGCCGCCGTTCGCGACATCGTCAACCACCAAACACGCCGCGTCTCCTCCGTCAAGGCCTCCCCCTCCACCACCGTCTCCGTTCTGCTTCCCGATTGGGAGATTCTAGTCCTCGTCTCACCAAACACGCACTCATCCTCTTCCCCCGACGATCACCGCTACTGCCTTTTCCCCAACAATGCCAGGTCTCCGGCCAGTTACTCCGGCGTCTTACCATTCACCAACCGTACCACGTTCAAGTGCGACCTGCCGGAATCAGTTCGCCGCCGCCGCGTCTTCCCGCAGCCTATGCTAGTCTCCGGAACACCAGAGACTGAATCGCCGGTTAGTTCTCCGGCGCCGGAGCTCATGAGATGGAACTTTCTCGTCTACGAGTCTTTCTCAACGGACGACGACGTCGTTGTATTCGCCAAAGGAGTGAACCACCGCCAAGGCTACGACAGATCCCCGAACGAGCTCCGCTGCGTCTTCAAACTAGCAGACGGCGGAGACAGCATCAACACCGCCGTCACGAGCTCCGCTCAAGAGGTTTTCCGATGCGCGCACCCCGATTTGGATTTGAATTCCGATCACGCCTTGTCTGAAAACGGCAACAGAATCAGAATTTCAATTTCCCTCGAGATTATTGGCGAAAATCTCGTGATTCCCTCCATCGCATATTACAGGCCCAGGCCCAGTCGAGAGGCCCAAGCCCAGGCCCAGCCCAAACATTTCTTGTGTGCTTGCACGATGGTTTACAACGTAGCGAAATTCTTACGCGAATGGGTGATGTACCACACGAAAGTGGGAGTGGAGAATTTCATACTGTACGATAACGGCAGCGACGATGACTTCGCCGGCGAGGTGAAGAATCTCCGATCGGAGGGTTACAACATCACCACATTGCTCTGGATTTGGCCCAAGACGCAGGAAGCTGGATTTTCACACAGTGTTGTTTACTCCAAGGCGAAGGGACTATGCAATTGGATAATGTACGTGGATGTTGACGAATTCGTGTATTCTCCGGCTTGGAGAATTGGAGATGAATCTCCGATTTCATCTCCATCGTTGAAATCGATGCTGGTAGGAGGTGAGGGTGAGAATGGGAATGGGATTAGGGTTGGACAAGTGTCGATGCGGTGTTTGGAATTCGGGCCGTCGGGACAGCGGTTACACCCGGCGGAAGGGGTAACACGAGGGTACACGTGTCGGCGGAAGGTGGAGCGGAGGCACAAGTCGATTGTGCTGGTGGAGGCGGTGGATCGGGGGTTGAGGAACGTGGTGCATCATTTCGAGGTGAAGGAAGGGTTGAAGTGGAAGCAGGTTCGGGTGGAGGAAATGTTGGTGAATCATTACAAGTATCAGGCTTGGGATGAGTTCAAGAGCAAGTTTAGAAGGAGGGTTTCTGCGTATGTTGTGGATTGGAAGAAGAATGTGAACCTGGGTTCGAAGGATAGAACACCTGGGTTGGGATTTGAGGCAGTGGAACCTGAAGATTGGGCTAACAAGTTCTGTGAGGTTAGAGATGAAAGGTTGAAATTGTTGACACAAGCTTGGTTTGGATCCTACAACAACGCCTCCTCAAGGTTATAG 1716 0.5326 MRRRTTFLLSLLAILLFATFSLHLSRNAISTSQPYSYLHNANFNTNENVAAVRDIVNHQTRRVSSVKASPSTTVSVLLPDWEILVLVSPNTHSSSSPDDHRYCLFPNNARSPASYSGVLPFTNRTTFKCDLPESVRRRRVFPQPMLVSGTPETESPVSSPAPELMRWNFLVYESFSTDDDVVVFAKGVNHRQGYDRSPNELRCVFKLADGGDSINTAVTSSAQEVFRCAHPDLDLNSDHALSENGNRIRISISLEIIGENLVIPSIAYYRPRPSREAQAQAQPKHFLCACTMVYNVAKFLREWVMYHTKVGVENFILYDNGSDDDFAGEVKNLRSEGYNITTLLWIWPKTQEAGFSHSVVYSKAKGLCNWIMYVDVDEFVYSPAWRIGDESPISSPSLKSMLVGGEGENGNGIRVGQVSMRCLEFGPSGQRLHPAEGVTRGYTCRRKVERRHKSIVLVEAVDRGLRNVVHHFEVKEGLKWKQVRVEEMLVNHYKYQAWDEFKSKFRRRVSAYVVDWKKNVNLGSKDRTPGLGFEAVEPEDWANKFCEVRDERLKLLTQAWFGSYNNASSRL* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2299 571 Pfam Glycosyltransferase family 92 286 510 IPR008166 -
Lja1g2299 571 PANTHER GLYCOSYLTRANSFERASE FAMILY 92 PROTEIN 4 562 - -
Lja1g2299 571 PANTHER UNCHARACTERIZED 4 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2299 Lja-Chr1 26710471 26712186 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2299 - - gmx:100783546 746.503
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2299 1 26710471 26712186 Lja1g2299 1 26710471 26712186 ECH