Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2296 ATGACCATGATAGAAAAAGAAGAAGAGAACAAGAAGATGCAAGTGGTGGAGGAGACAAAAGATGTGATACCTCTCCTCACCCCATTGAAGATGAGAAAATTCAATCTATCCCACAGGATAGTTCTGGCACCGTTAACAAGAACAAGGTCTTACAACTTCGTGGCTCAGCCACATGCTGCTCTCTATTATTCTCAACGAGCAACAAAAGGTGGCTTCTTGATTGGGGAAGCTTCTGGTGTGTCAGACACAGCACAAGGGTACCCAAATACACCTGGCATTTGGACAACAGAACAGGTGCAAGCATGGAAACCAATTGTAGAAGCTGTTCATAAAAAGGGGGGCATATTCTTCTGCCAACTCTGGCATGCAGGGAGAGTATCCAACTATGGTTTCCAACCAGATGGGCAGCCTCCAATCTCAAGCACAAACAAGGCAGTTCAAAAGGAAGGTAGCAGCACTAAATACCCACCTCCTCGCCCTCTCACAACCGGCGAAATCCCAAAGGTTGTCCATGACTTCAGAATGGCAGCGAAAAATGCCATAGAAGCAGGCTTTGATGGAGTGGAGATACATGGAGCCAATGGATACTTGCTAGAACAGTTCCTAAAGGACAAGGTGAATGATAGAGATGATGAGTATGGAGGTACTTTACAAAACCGTTGTCGCTTCCCGCTAGAGGTGATGAAGGCAGTGGTTGATGAGATTGGAGCTGACAAAGTCGGTGTGAGGCTTTCCCCTTACGCTGACTACTGTGATTGTGGAGACTCTAACCCTCAAGCATTGGGCATATACATGGCTCAGGCACTGAGTCAACTCAGCGTTCTCTATTGCCATGTAATTGAACCAAGGATGAAAACAATGTTTGATAAGTCTGATTCCAATAATGTGTCCCTGATGCCAATGCGGAAGGCCTTCACTGGAACTTTCATTGTTGCTGGCGGGTACAATAGGAGTGAAGGAAACAGAGTGATAGCGAGTGGTGGCGCAGATTTGGTGGCTTATGGACGCTTGTTTCTGGCAAATCCAGATCTGCCTAGAAGGTTTCAGCTGGATGCTGAGTTGAACGAAGCTGATAGAAGCACTTTTTACACCACTGATCCTGTTATCGGATATACAGATTATCCATTTCTTGAAAATACAAACTAG 1146 0.4564 MTMIEKEEENKKMQVVEETKDVIPLLTPLKMRKFNLSHRIVLAPLTRTRSYNFVAQPHAALYYSQRATKGGFLIGEASGVSDTAQGYPNTPGIWTTEQVQAWKPIVEAVHKKGGIFFCQLWHAGRVSNYGFQPDGQPPISSTNKAVQKEGSSTKYPPPRPLTTGEIPKVVHDFRMAAKNAIEAGFDGVEIHGANGYLLEQFLKDKVNDRDDEYGGTLQNRCRFPLEVMKAVVDEIGADKVGVRLSPYADYCDCGDSNPQALGIYMAQALSQLSVLYCHVIEPRMKTMFDKSDSNNVSLMPMRKAFTGTFIVAGGYNRSEGNRVIASGGADLVAYGRLFLANPDLPRRFQLDAELNEADRSTFYTTDPVIGYTDYPFLENTN* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2296 381 SUPERFAMILY FMN-linked oxidoreductases 24 378 - -
Lja1g2296 381 PANTHER 12-OXOPHYTODIENOATE REDUCTASE-LIKE PROTEIN 21 380 - -
Lja1g2296 381 MobiDBLite consensus disorder prediction 132 163 - -
Lja1g2296 381 Pfam NADH:flavin oxidoreductase / NADH oxidase family 25 352 IPR001155 GO:0010181|GO:0016491
Lja1g2296 381 PANTHER NADH OXIDOREDUCTASE-RELATED 21 380 IPR045247 GO:0010181|GO:0016491
Lja1g2296 381 CDD OYE_like_FMN 24 359 - -
Lja1g2296 381 MobiDBLite consensus disorder prediction 133 150 - -
Lja1g2296 381 Gene3D Aldolase class I 11 381 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2296 Lja-Chr1 26695275 26697685 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2296 13 380 Acyl Lipid Metabolism Gene Families AT1G76690 65.508 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2296 K05894 - gmx:100790284 639.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2296 1 26695275 26697685 Lja1g2296 1 26695275 26697685 ECH