Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2287 ATGGCGTATTCGCGTCTCTTCTTCATCTTCTTCGTCTTCTTCGCAGTGTTACACACAGCACCATCCAATGCCATCGATGACAAATGTGCCGCCTGTAAAGCTGTAGCTGAGGAGCTAGAGATTGGGCTTTCCAGGGAGAAGCCGCGGAACCATTTGGATATGCGCCATCGATTGGACTCCAAGGGCCAGCGTCAGGGAAAGCTAATCGATTACAGAGTTAGCGACCTAAGGGTTGTTGAGCTTCTTGATGGTCTTTGCGAAAAGATGCAAGACTACACACTCATGATAGATACTGATACATATGAATGGTTCAAAGTGGATAGCTGGGATAACCTCACAAAAAATAAGCAAGAAGCTCGAGCATATTCAAAAGATATATCTTCTTATTGTGGAAGATTACTTGAAGACACGGAAGAAGAGTTGGCTGAATTGATAAAGAAAGGATCGGTTAAAGTGGGAGATGTGAGCAAAGTTCTTTGTCAAGATTTGAGCAAACATTGCAGTCGAACGAGAGTATCACACGAGGCTGAAGTCGTTGATGATGGTGATAAAGAAGAGCTCTAA 564 0.4379 MAYSRLFFIFFVFFAVLHTAPSNAIDDKCAACKAVAEELEIGLSREKPRNHLDMRHRLDSKGQRQGKLIDYRVSDLRVVELLDGLCEKMQDYTLMIDTDTYEWFKVDSWDNLTKNKQEARAYSKDISSYCGRLLEDTEEELAELIKKGSVKVGDVSKVLCQDLSKHCSRTRVSHEAEVVDDGDKEEL* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2287 187 PANTHER OS02G0117200 PROTEIN 8 177 - -
Lja1g2287 187 PANTHER OS02G0117200 PROTEIN 8 177 - -
Lja1g2287 187 Pfam TLR4 regulator and MIR-interacting MSAP 28 167 IPR021852 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2287 Lja-Chr1 26610480 26618862 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2287 K22936 - gmx:100781382 285.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2287 1 26610480 26618862 Lja1g2287 1 26610480 26618862 ECH