Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2284 ATGGCTGCTGCTGTTTCCTCTTCTTTCGTCCTCACCAAATCCGTGTCATCCATAAATAAGGTGGATCACTCACGAGTGATGATCAAACCGTCCGGCTTGTCACAAAATCTAAATTGTCAAGGGAGAACTCAACTATCTTTGACTAGAAGGCCTCTAACAGTTCAAGCTACATATAGTGATGGTGGAAGGCCCAGCGGTGCTAGCGTCTTTGTTGGTGGCTTCGTCTTGGGAGGATTAATAGTTGGCACCCTTGGTGCTGTGTATGCACCTCAGATCAGCAAGGCTTTAGCTGGAGCTGACAAGAAGGAGTTAATGAGAAAACTGCCAAAGTTTATATATGATGAAGAAAAGGCTTTAGAGAAAACACGGAAAGTACTGGCTGAGAAGATTGAACAATTGAATGCTGCCATAGATGAAGTTTCCTCTCAGCTTCGGTCAGAGGATGAGGGTCCTAATGGAGTAGCTGTGAACTCTGATGAACTAGAAGCTGCCGCATGA 498 0.4518 MAAAVSSSFVLTKSVSSINKVDHSRVMIKPSGLSQNLNCQGRTQLSLTRRPLTVQATYSDGGRPSGASVFVGGFVLGGLIVGTLGAVYAPQISKALAGADKKELMRKLPKFIYDEEKALEKTRKVLAEKIEQLNAAIDEVSSQLRSEDEGPNGVAVNSDELEAAA* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2284 165 Coils Coil 116 143 - -
Lja1g2284 165 PANTHER LOW-DENSITY RECEPTOR-LIKE PROTEIN 12 164 - -
Lja1g2284 165 MobiDBLite consensus disorder prediction 141 165 - -
Lja1g2284 165 PANTHER INNER MEMBRANE LOCALIZED PROTEIN 12 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2284 Lja-Chr1 26588469 26591397 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2284 - - gmx:100306344 236.498
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2284 1 26588469 26591397 Lja1g2284 1 26588469 26591397 ECH