Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2282 ATGGCTCGGCGCCGCCATGGATGGGAGCTTCCTTTTCACACTTTTCAGGTTGTGGCGATAACGGTTTTTTTCGTGTTATCCACTGCGTATTATGTCTTCTTTGCTCCTTTTCTCGGAAAGGATATCTATGAGTATGTGGCTTTGGGTGTTTACTCTGTACTGGCTCTCTCTGTGTTCGTTCTTTATGTTCGGTGCACTGCCATTGATCCTGCTGATTTAGGAGTAATGCATGACTGTGACCAGACATCTAAAAAAGGATCAAAACTTGATGAAGAGTTGGCAGAACCCAGCAAGGTAGGACCAAATGGCGAAGTAATGTCTGATTTGCATAATTCAAATTGGTGCTCCACACTTGGATGTTTCTTTTGTAGTTTCCTTGCTAGGGAAGATTGCCGCAGTAATGAAGATATTACTCTACAGCAGCAATCTGGAGAGGAGGATGTTTTGTTCTGTACTTTGTGCAATGCTGAGGTGCGGAAGTACAGTAAGCATTGTAGAAGTTGTGACAAATGTGTTGATGGATTTGATCACCATTGCCGGTGGTTGAACAATTGTGTTGGAAGGAAGAATTACATCACATTTGTGTGCCTCATGGCAGTGAGCCTAGTTTGGCTTATAGTTGAATGTGGAGTAGGGATTGCCGTCCTTGTCAGATGCTTTGTTGATCAGAGGGGTACTGAGAATCAAATAGCTCTAAAGCTTGGAGCTGGATTCTCTCGAATCCCATTTGCTATTATAGTGGCCCTATGCACAGCAGTTTCTTTCCTTGCAACTGTACCTTTGGGTGAATTATTCTTTTTTCATATGATCCTCATTCGCAAGGGTATCACCACATACGAGTATGTCGTTGCCATGAGAACTCTAAGTGAACCACCTGGGCCTTCAGTTGATGGGGGTGAACAGCACAGTCTACAATCATCTCCTGCTAGTTCAGCTGTCACCGGAATAAGTGGAAGAAGCTCTGTTGGATTGAGTTTGCAACACAAAGGTGCTTGGTGTACACCTCCAAGGATATTTATGGATCACCCGGATGAAATTATACCACATTTGGAGCCAGGAAGCCTACCATCAACTGTTGATCCAGATGCAATACCTGACAAAGGGAAAAGGGTGAACAGGCGCCCTGTGCGAATAAGCGCGTGGAATCTTGCAAAATTGGATTCTAATGAGGCAGCTAAGGCAGCAGCTAAAGCTAGAGCATCATCATCTGTGCTTCGCCCAATAAGTTCCCGATCTCATGCATATGATGTTGATCATTTATCTAGTAGCAATGTTAGTGGAAGAAGCAGCCCTATTAGCAATCAAGGATTTAGCAACAAATATGATACTGCAGGTACATCGAAGTTATCTCCTTACAAGAGCTCAAACCCTCCTAGTCAAGCAAGCAAGGAAGATATAGATGCATGTCAACAGAGTATGAGTAACTTCAGCAGTCCTCAAGTCTCCAACTTTGCTCCTTCACCAGGGCTAAAGCCGGACTTGAACAGAGACCATTTCAACCCCATGTATCAACAACCATCAGGAAACCAGTCTCCTTCATCAGCTAAAGAAAGCGAAAGGAATGTAAATCCAGTTCATGAAAATGGTGCACGTGTACCAATGAGAAGTAACAGACTAGCTATTCCAGAGAATAGAAGATCGTCAGTGTTTTGGGATCAAGCAGCCGGGCGCTTTGTGTCCTCCTCATCTAGAGGTCATGGCAGTTCTCAGGCTTCTGGAACAGAGTTATTGTACACTGGTCGTAATATATTTTTTGGCAGTCCTGTCGTGAATGAACAACCAACTACGGGAACAAGAAATAGCAGCTCAGTAGTTGCTGGTATTTCGGATAGAGATTCTATGTCAAGGGATTTTCAGCAAGGTAGATCACATAGAGGTGCCCAGCTTCCTGTGTTTGTTCCTGGTTATTCCCAGCAAAACAAGTTCTCTTAG 1932 0.4394 MARRRHGWELPFHTFQVVAITVFFVLSTAYYVFFAPFLGKDIYEYVALGVYSVLALSVFVLYVRCTAIDPADLGVMHDCDQTSKKGSKLDEELAEPSKVGPNGEVMSDLHNSNWCSTLGCFFCSFLAREDCRSNEDITLQQQSGEEDVLFCTLCNAEVRKYSKHCRSCDKCVDGFDHHCRWLNNCVGRKNYITFVCLMAVSLVWLIVECGVGIAVLVRCFVDQRGTENQIALKLGAGFSRIPFAIIVALCTAVSFLATVPLGELFFFHMILIRKGITTYEYVVAMRTLSEPPGPSVDGGEQHSLQSSPASSAVTGISGRSSVGLSLQHKGAWCTPPRIFMDHPDEIIPHLEPGSLPSTVDPDAIPDKGKRVNRRPVRISAWNLAKLDSNEAAKAAAKARASSSVLRPISSRSHAYDVDHLSSSNVSGRSSPISNQGFSNKYDTAGTSKLSPYKSSNPPSQASKEDIDACQQSMSNFSSPQVSNFAPSPGLKPDLNRDHFNPMYQQPSGNQSPSSAKESERNVNPVHENGARVPMRSNRLAIPENRRSSVFWDQAAGRFVSSSSRGHGSSQASGTELLYTGRNIFFGSPVVNEQPTTGTRNSSSVVAGISDRDSMSRDFQQGRSHRGAQLPVFVPGYSQQNKFS* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2282 643 MobiDBLite consensus disorder prediction 419 485 - -
Lja1g2282 643 ProSiteProfiles DHHC domain profile. 149 199 - -
Lja1g2282 643 MobiDBLite consensus disorder prediction 589 643 - -
Lja1g2282 643 Pfam DHHC palmitoyltransferase 149 283 IPR001594 GO:0016409
Lja1g2282 643 PANTHER PROTEIN S-ACYLTRANSFERASE 21 10 485 - -
Lja1g2282 643 MobiDBLite consensus disorder prediction 419 529 - -
Lja1g2282 643 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 10 485 - -
Lja1g2282 643 MobiDBLite consensus disorder prediction 500 519 - -
Lja1g2282 643 MobiDBLite consensus disorder prediction 350 371 - -
Lja1g2282 643 MobiDBLite consensus disorder prediction 589 609 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2282 Lja-Chr1 26574217 26579611 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g2282 142 191 Lipid Metabolism Gene Families AT4G22750 42.000 1.75e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2282 K20027 - gmx:100818808 1110.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2282 1 26574217 26579611 Lja1g2282 1 26574217 26579611 ECH