Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2280 ATGACTTCTCCCGGCAATTGCACTTGCACCTGCAATTCAATAACTTTGTTGGGAGAGAAATTGAGCTTCGGTTATGGCGGTGGCGGTGGTGGTGGCGGCGTGCTTTCAAATTTGAATTTGAATCCAAAAGCCAAGTCCAGAGGAGTAGTTACAGTAGCAGCACTTTCACCTTCACAATCCAGAAGGTCGACGGCGGTTCTGATTTCATTGTTGCCTTTAACCGTCGATTGGCTCACTACGCCGCCGCCGGCCGCCGCCAGGGAGAGACGCAACAAGAAGAACATCCCCATTGATGAGTATCTTACTAGCCCTGATGGATTGAAGTACTATGATTTGGTTGAGGGTAAAGGTTCAGTAGCTGAAAAAGGATCAACTGTTCAGGTACACTTTGATTGCTTATATCGCGGAGTTACGGCTGTGTCGAGCAGAGAATCTAAAATCCTTGCTGGAAATCGTACAATTGCTCAGCCGTATGAATTCAAGGTGGGAGCTCCACCAGGAAGGGAAAGGAAGCGTGACTTTGTAGACAACCCGAATGGTCTGTTCTCTGCACAAGCATCACCAAAACCTCCAGCAGCTATGTATACAATTGTGGAAGGAATGCGAGTTGGTGGAAAGCGAACTGTGCTCGTTCCTCCTGAAAATGGGTATGGAAAAAGGGGAATGAATGAGATTCCGCCTGGAGCTACATTTGAAATGAATATTGAGCTTTTGCAAGTTAAAACTACCTGA 732 0.4686 MTSPGNCTCTCNSITLLGEKLSFGYGGGGGGGGVLSNLNLNPKAKSRGVVTVAALSPSQSRRSTAVLISLLPLTVDWLTTPPPAAARERRNKKNIPIDEYLTSPDGLKYYDLVEGKGSVAEKGSTVQVHFDCLYRGVTAVSSRESKILAGNRTIAQPYEFKVGAPPGRERKRDFVDNPNGLFSAQASPKPPAAMYTIVEGMRVGGKRTVLVPPENGYGKRGMNEIPPGATFEMNIELLQVKTT* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2280 243 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 119 238 IPR001179 GO:0003755
Lja1g2280 243 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP18, CHLOROPLASTIC 51 242 IPR044180 -
Lja1g2280 243 Gene3D - 83 243 IPR046357 GO:0003755
Lja1g2280 243 SUPERFAMILY FKBP-like 84 241 - -
Lja1g2280 243 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 123 241 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2280 Lja-Chr1 26542091 26544472 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2280 K01802 - gmx:100527183 308.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2280 1 26542091 26544472 Lja1g2280 1 26542091 26544472 ECH