Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g2088 ATGGATGACAACAATCACATGGAGCCATGGGATTGGCATAGGGAGGATTATTATTGTCTCCAAAACAGTGAAAACACTTCCAATTTTGACGAAGATCTTCCGTACGTGTTCGGTGATGAAACAACCCCAGTGAAGGCTTGTGGGGATTTTGAATACAATGTCAATAATAATGAATCACATAATATGCAAAAGGAAACAGAGAAATGTTGGGAGACTTCGTCCCAAGTCAAGAGACGGCGGATGCTACAGTTCAATACTCGAGATGAGCATCATTCCCTTTGCAATGAAGAAATTTCTTTAGAGTGTTTGAAATTAAATGGGAAGGAGGACTCAAATGAGGACGTTTTGACAGAAGTTTCACAATGGCTGTCTGGGCCTTCAGGAAATCCATCTGCTTCTAATTGCGAGGACGTTGTGTCAGCTGAAGGGTGGCTTGCAGATTGTTTTAGTGATGCTGAAATGCAATTATGCCCCGATGATTTGAATTTTTCCAGGGGAAATGATGTTCATATTGATGTTGCAGAGCTGTGCAACTTCACACCAGTGTCTGAACAGAAAGCAGTTCAGCATCACATCACTCAAACCCCCACAAATATTGTCTTCAAAGGGCGGAAATCTTTTATACGACCACCCACAAAGTTACCTTGTTCTGTAGCCTATCCATTTGCCTTCATTAAACCCAGTGGTACTGATGGAGATGTCACTCTGAAGGAAATAAATCAGCGCATTCAGTGTTCACCGACTTCAAAACCAAAGCAAACCAGGGAAGATCCAAAATACCCCAAATCAGCCTTTTCAGGGAAGCCTGTAGTTGGAAAAATGAAAATTCACACTGAAGGGGGGAAAGGTAGCATCACTATTATGAGAACTAGAGGTTAG 879 0.4198 MDDNNHMEPWDWHREDYYCLQNSENTSNFDEDLPYVFGDETTPVKACGDFEYNVNNNESHNMQKETEKCWETSSQVKRRRMLQFNTRDEHHSLCNEEISLECLKLNGKEDSNEDVLTEVSQWLSGPSGNPSASNCEDVVSAEGWLADCFSDAEMQLCPDDLNFSRGNDVHIDVAELCNFTPVSEQKAVQHHITQTPTNIVFKGRKSFIRPPTKLPCSVAYPFAFIKPSGTDGDVTLKEINQRIQCSPTSKPKQTREDPKYPKSAFSGKPVVGKMKIHTEGGKGSITIMRTRG* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g2088 292 PANTHER INDUCED TRANSCRIPT PROTEIN, PUTATIVE-RELATED 3 292 - -
Lja1g2088 292 MobiDBLite consensus disorder prediction 246 270 - -
Lja1g2088 292 PANTHER PROTEIN XRI1 3 292 IPR039933 GO:0007140|GO:0007143
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g2088 Lja-Chr1 24158204 24161168 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g2088 - - lja:Lj0g3v0139099.1 439.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2088 1 24158204 24161168 Lja3g4435 3 85788455 85792138 PCT