Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1799 ATGGACATCCTCTTCGCGCAGATCCAGGCGGATCTCCGCTCCAACGACGCGCTCCGCCAATCCAGCGCCCTGCTGCAAGCCCTGCAGCAGTCCGCGGCGGGGCGCGACATCGCCGTCATCGCCAAAACCGCCGTGGAAGAGATCGTTGCAGCACCGGCCTCCACCGTCTGCAAGAAGCTCGCCTTCAACCTCATCCGCTCCACGCGCCTCACCCCCGATCTCTGGGACACCGTCTGCGGCGGCATCCGCAACGACTTCCATTTCCCCGACCCCGACGTCACCGCCGCCGCCGTCTCCATCCTCGCCGCGATCCCGTCCTACCGCCTTGCCAAGCTCATCGCTGATTGCAACAAGGAGATCTCCGACTGCTTCGACTCCCCCAGCGACACTCTCCGATTCTCCATCACCGAAACCCTCGGCTCCGTTCTTGCTCGCGATGACCTTGTCACGCTCTGCGAGAACAATGTCAACCTTCTCGACCGCGTCTCCGCCTGGTGGACCCGCATCGGCAACAACATGCTTGACCGTTCCGATATCGTCGCGAAGGTCGCGTTCGATTCCGTCGGGAGGCTCTTCCAGGAGTTCACCACCAAGCGGATGAGCAGGCTCGCCGGAGATAAGCTTGTGGACAGCGAGAATTCCCTTGCTATCCGGTCCAATTGGGTTTCCTCCATGGTTGATCTCGTTTGGAGGAAGCGCAGCGCTCTAATGGCGCGATCGTTGGTCTTGCCCGTTGAGAGCTTCCGCGCCACGGTGTTTCCAGTCGTTTACTCCGTTAAGGCCGTCGCCTCCGGTAGCGTCGAGGTGATTCGGAAGCTGTCCAAGGCTTCTGGTAATGCTGCCGGGGGTAATGAGGTTGATTCCAATGCGGAGAAGTTGGTGGGTGTTTCGGATGTGGTTACTCACTTGGCACCCTTCTTGGTTTCGTCGTTGGAACCCGCGTTGATTTATGAGGTGGGGATTAATATGCTTTATCTGGCTGATGTGCCTGGAGGGAAGCCTGAGTGGGCATCACAATCCATCATTGCCATTCTCACTCTGTGGGATAGGCAGGAATTTACATCTGCTAGAGAGAGTATTGTTAGAGCTGTTGTTACCAATCTTCATCTCCTTGATCTTAACATGCAGGTATCACTGTTCAAGAGGCTACTTTTAATGGTGAGAAACTTGAGAGCAGAATCAGATCGCATGCATGCTTTAGCATGTATATGTAGAACAGCTCTTTGTGTAGACCTATTTGCCAAGGAAAGTGTCCGAAGAGGGCAGAAACCTCTTGCTGGAACTGATATTGCTTCCCTTTTTGAGGATACCAGAGTGAATGATGATCTTAATAGCATTACAAGTAAAAGCATATTTAGGGAGGAGTTAGTTGCATCACTAGTGGAAAGTTGCTTTCAGCTGTCTTTGCCTTTGCCTGAACAAAATAACACTGGCATGGAGAGCAGGGTCATTGGAGCTTTGGCATATGGAACTGGTTATGGTGCCTTAAACTGGACTGAACCTGCTTTAGAAGTAGTGGAAGTTTGCCGGCCTTGCGTTAAATGGGATTGTGGTGGCCGCACCTATGCGATTGACTGCTACTTGAAGTTGCTTGTTAGGTTGTGCTACATATATGATACTAGGGGTGGTGTAAAAAGAGTCAAAGACGGAGCTTCTCAGGACCAAATTTTGAATGAGACTAGGCTGCAAAACTTGCAACGTGAACTTGTGAAGGACTTACGTGAGGTGAATACACCAAGAATATTGGCCCGCCTTATATGGGCTATTGCGGAGCACATAGATATAGAAGGATTGGATCCACTCCTTGCAGATGACCCGGATGATCCTCTTAATGTCATTATATCAAATATTCACAAGGTTCTTTTCAATATTGATTCAACTGCAGAAACAACAAATAGAGTTCAGGATGTACAGGCAGTTCTTATATCTGCTCAACGGTTGGGATCGCGCCACCCTAGGGCTGGCCAGCTACTTACCAAAGAGCTTGAAGAGTTTAGGAGCAATCCTTTGGCTGATTCTGTCAGCAAGCATCAATGCCGTTTGATATTGCAAAGAATCAAATATGCTTCAGCTCATCAAGATAGTAGGTGGGCAGGGGTTACAGCAGCAAGAGGGGATTACCCATTCAGCCACCACAAATTAACTGTTCAGTTTTATGAAGCATCTGCTGCTCAGGATAGAAAGTTGGAAGGATTGGTTCACAAGGCTATTTTAGAGCTATGGAGACCTGACCCCAGTGAACTAACCCTTTTGCTGACACAAGGAGTTGATTCTACTTTACTTAAAGTTCCTCCTACTGCAATTACTTTAACTGGAAGCAGTGATCCTTGCTATGTTGAAGGTTACCATTTAGCAGATTCAGGAGATGGGAGGATCACTCTGCATTTAAAGGTTTTAAACTTAACTGAGCTTGAATTAAATCGGGTAGATGTGCGTGTGGGATTATCAGGCGCATTATATTATATGGATGGTTCTTCTCAAGCAGTGAGGCAGTTGCGTAGTCTTGGTTCACAGGATCCAGTGCTATGTAGTGTGACAGTTGGTGTTTCTCACTTTGAAAGATGTGCCCTTTGGGTTCAAGTGTTGTATTACCCATTCTATGGTAGTGGTGCTGTTGGCAACTATGAAGGTGACTACGCTGAAGAGGATCCTCAAATCGTGAGACAGAAGAGAAGCTTAAGACCTGAATTGGGTGAACCTGTGATTTTGAGATGTCAGCCTTATAAAATTCCATTGACTGAGCTTCTTTTGCCACACCAAATATCACCGGTTGAGTTTTTTCGACTATGGCCCAGTTTGCCAGCTGTTTTAGAATACACTGGTGGATATACATATGAAGGAAGTGGCTTTAAGGCTACTGCAGCCCAACAGTATGGCGCATCTCCTTTCTTAAGTGGATTGAAATCATTGTCTTCAAAGCCATTTCACAAAGTCTGTTCACATATTATTCGCACAGTGGCAGGATTTCAGTTGTGTTATGCTGCTAAAACTTGGCATGGTGGCTTCTTGGGCTTGATGATTTTTGGTGCAAGTGAGGTGAGTAGAAACGTGGATTTGGGTGATGAGACGACAAGCATGATGTGCAAGTTCGTGGTACGAGCATCCGACGCATCTATTACTAAGGAAATTGGATCAGATCTTCAAGGCTGGTTGGATGACCTAACTGATGGTGGTGTCGAGTACATGCCTGAAGATGAAGTGAAAACAGCTGCTGCTGAGAGGCTTCGAATATCAATGGAAAGGATAGCCTTGTTGAAGGCAGCCCAACCGCGGCCCAAGACTCCGAAATCCGATGATGAAGATGAAGAGGAAGATAAAGATAAAGAAAAGAAGGATGGGGAGGAAGATGAGAAAAAGAAGGGACCTTCTACACTATCAAAATTAACTGCTGAGGAGGCTGAGCATCAAGCTCTTCAAGCAGCAGTACTACAGGAGTGGCATATGCTCTGCAAGGATAGAAGCACTGAAGTTAACTAA 3477 0.4806 MDILFAQIQADLRSNDALRQSSALLQALQQSAAGRDIAVIAKTAVEEIVAAPASTVCKKLAFNLIRSTRLTPDLWDTVCGGIRNDFHFPDPDVTAAAVSILAAIPSYRLAKLIADCNKEISDCFDSPSDTLRFSITETLGSVLARDDLVTLCENNVNLLDRVSAWWTRIGNNMLDRSDIVAKVAFDSVGRLFQEFTTKRMSRLAGDKLVDSENSLAIRSNWVSSMVDLVWRKRSALMARSLVLPVESFRATVFPVVYSVKAVASGSVEVIRKLSKASGNAAGGNEVDSNAEKLVGVSDVVTHLAPFLVSSLEPALIYEVGINMLYLADVPGGKPEWASQSIIAILTLWDRQEFTSARESIVRAVVTNLHLLDLNMQVSLFKRLLLMVRNLRAESDRMHALACICRTALCVDLFAKESVRRGQKPLAGTDIASLFEDTRVNDDLNSITSKSIFREELVASLVESCFQLSLPLPEQNNTGMESRVIGALAYGTGYGALNWTEPALEVVEVCRPCVKWDCGGRTYAIDCYLKLLVRLCYIYDTRGGVKRVKDGASQDQILNETRLQNLQRELVKDLREVNTPRILARLIWAIAEHIDIEGLDPLLADDPDDPLNVIISNIHKVLFNIDSTAETTNRVQDVQAVLISAQRLGSRHPRAGQLLTKELEEFRSNPLADSVSKHQCRLILQRIKYASAHQDSRWAGVTAARGDYPFSHHKLTVQFYEASAAQDRKLEGLVHKAILELWRPDPSELTLLLTQGVDSTLLKVPPTAITLTGSSDPCYVEGYHLADSGDGRITLHLKVLNLTELELNRVDVRVGLSGALYYMDGSSQAVRQLRSLGSQDPVLCSVTVGVSHFERCALWVQVLYYPFYGSGAVGNYEGDYAEEDPQIVRQKRSLRPELGEPVILRCQPYKIPLTELLLPHQISPVEFFRLWPSLPAVLEYTGGYTYEGSGFKATAAQQYGASPFLSGLKSLSSKPFHKVCSHIIRTVAGFQLCYAAKTWHGGFLGLMIFGASEVSRNVDLGDETTSMMCKFVVRASDASITKEIGSDLQGWLDDLTDGGVEYMPEDEVKTAAAERLRISMERIALLKAAQPRPKTPKSDDEDEEEDKDKEKKDGEEDEKKKGPSTLSKLTAEEAEHQALQAAVLQEWHMLCKDRSTEVN* 1159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1799 1158 MobiDBLite consensus disorder prediction 1086 1132 - -
Lja1g1799 1158 MobiDBLite consensus disorder prediction 1111 1125 - -
Lja1g1799 1158 PANTHER TSET COMPLEX MEMBER TSTA 1 1156 IPR037501 GO:0006897
Lja1g1799 1158 SUPERFAMILY ARM repeat 4 650 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1799 Lja-Chr1 20386208 20393641 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1799 1 838 EF-hand Containing Proteins AT3G01780 84.762 0.0 1433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1799 - - gmx:100781324 2075.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1799 1 20386208 20393641 Lja1g1799 1 20386208 20393641 ECH