Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1791 ATGACATCTCGCCTGGCTCTCGCTAAGTACCTCCCTCCCTCCCGCATGCAGCAGCAGCAGCAGCCTCAAGTTGACTCACAAATGGCGTCCTCTGCAACTGCAAAACATGATAACCCAAGGTCTGTCAAAAGAGTAGCTGTTGTTGGTGCTGGGGTAAGTGGGCTTGCGGCGGCTTATAAATTGAAATCACATGGCCTGGATGTCACTGTATTTGAAGCTGATGGAAGAGCCGGAGGGAAGTTGAAAAGTGTTTCTCAAGATGGTCTAGTTTGGGATGAGGGAGCTAATACAATGATCGAAAATGGAATGGAGGTTACAGGATTGATTGATGCTCTTGGGCTTCAAGAAAAGCAACAATTTCCTATTTCACAGCATAAGCGTTATATTGTGAAAAATGGGACACCACTACTGGTACCCACAAATCCTGTTGCACTACTGCAGAGCAAATTGCTTTCTGCACAATCAAAGATCCGGATCATATTTGAACCATTAATGTGGAAAAGAAGCGACTCCTCCAAAGTCTGTGATGAAGATTCTCAGGAAAGTGTGGGCAGGTTCTTTGAGCGTCATTTTGGGAAAGAGGTTGTGGAGTATCTAATTGATCCTTTTGTTGGAGGTACAAGTGCAGCAGATCCTGAATCTCTTTCTGTGCGCCATTCTTTCCCAGAGCTATGGAATTTGGAGAAAAGGTTTGGCTCTATTATAGCTGGGGCTTTGCAATCAAATTTATTTGCCAAAAGGAACAAAACTGGAGAAACTAAAGTTGCACAAAGAAAAAACAAACCCAAGCGTGGTTCGTTTTCTTTCCAGGGTGGGATGCAGACACTGACCGATACATTGTGCAAAGAGCTTGGAAAAGATGACCTAAAATTAAATGCAAAGGTTTTGACATTAGCTTACAGTCATGATGGAAGTTCCTCATCACAAAACTGGTCTATTACTTCTACTTCTAACCAGAACACTCCAGTGGTTGATGCAATAATCATGACGGCCCCTCTATGTAATGTCAAAGACATCAAGATCTCAAAAAGGGGAACCCCCTTTCCACTTAATTTTCTTCCTGAGGTGACCTATTTGCCACTCTCAGTCATAATTTCCACCTTTAAAAAGGAGAATGTAAAGAGACCTCTGGATGGATTTGGAGTTCTTGTTCCTTCAAAAGAGCAACAAAATGGTTTTAAAACCATGGGTACACTTTTTTCCTCTATAATGTTTCCAGATCGTGCACCTAGTGATTTATATCTCTATACCACCTTTGTTGGAGGATCTCGAAACATGGAACTGGCTCAAGCTTCCACTGATGAGCTTAAGAAAATTGTTACTTCTGATCTGAGAAAGTTGTTGGGAGCAGAAGGGGAGCCCTCATTTGTCAACCATTTCTATTGGAGTAAAGGCTTTCCTTTGTATGGCCGTAACTATGGATCAGTTCTTGAAGCTATTGACAAAATGGAAAAAGATCTCCCCGGATTTTTCTACGCAGGTAACCACAGAGGTGGACTCTCAGTTGGCAAAGCAATTGCCTCCGGTTGCAAAGCAGCTGATCTTGTAATCTCCTACCTCAACAATGCATCAGAAAGCATAGTGCCTGATAAATGA 1596 0.4261 MTSRLALAKYLPPSRMQQQQQPQVDSQMASSATAKHDNPRSVKRVAVVGAGVSGLAAAYKLKSHGLDVTVFEADGRAGGKLKSVSQDGLVWDEGANTMIENGMEVTGLIDALGLQEKQQFPISQHKRYIVKNGTPLLVPTNPVALLQSKLLSAQSKIRIIFEPLMWKRSDSSKVCDEDSQESVGRFFERHFGKEVVEYLIDPFVGGTSAADPESLSVRHSFPELWNLEKRFGSIIAGALQSNLFAKRNKTGETKVAQRKNKPKRGSFSFQGGMQTLTDTLCKELGKDDLKLNAKVLTLAYSHDGSSSSQNWSITSTSNQNTPVVDAIIMTAPLCNVKDIKISKRGTPFPLNFLPEVTYLPLSVIISTFKKENVKRPLDGFGVLVPSKEQQNGFKTMGTLFSSIMFPDRAPSDLYLYTTFVGGSRNMELAQASTDELKKIVTSDLRKLLGAEGEPSFVNHFYWSKGFPLYGRNYGSVLEAIDKMEKDLPGFFYAGNHRGGLSVGKAIASGCKAADLVISYLNNASESIVPDK* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1791 531 PRINTS Adrenodoxin reductase family signature 67 80 - -
Lja1g1791 531 PRINTS Adrenodoxin reductase family signature 44 66 - -
Lja1g1791 531 SUPERFAMILY FAD-linked reductases, C-terminal domain 358 467 - -
Lja1g1791 531 Gene3D Protoporphyrinogen oxidase, mitochondrial; domain 2 80 469 - -
Lja1g1791 531 MobiDBLite consensus disorder prediction 11 39 - -
Lja1g1791 531 MobiDBLite consensus disorder prediction 13 36 - -
Lja1g1791 531 PANTHER PROTOPORPHYRINOGEN OXIDASE 41 521 - -
Lja1g1791 531 PANTHER PROTOPORPHYRINOGEN OXIDASE 41 521 - -
Lja1g1791 531 Gene3D - 44 513 IPR036188 -
Lja1g1791 531 SUPERFAMILY FAD/NAD(P)-binding domain 43 520 IPR036188 -
Lja1g1791 531 Pfam Flavin containing amine oxidoreductase 52 517 IPR002937 GO:0016491
Lja1g1791 531 Gene3D protoporphyrinogen ix oxidase, domain 3 138 248 - -
Lja1g1791 531 TIGRFAM proto_IX_ox: protoporphyrinogen oxidase 43 521 IPR004572 GO:0004729|GO:0006779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1791 Lja-Chr1 20279244 20288275 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1791 K00231 - gmx:547941 860.522
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1791 1 20279244 20288275 Lja1g1791 1 20279244 20288275 ECH