Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1789 ATGAAAGGAAAGAACAGGAGAAGCGGCGGCATTGTGCAACTGGATTACCTGATTCACATTGAGGAGATTAAGCCTTGGCCCCCTTCACAATCTCTCAGATCGTGTCGCTCCGTATTGATACAATGGGAGAACGGGGAACGGTCTTCAGGATCTACCAACATAGCTTCTCCTTCACTTGGTTCAATTGTAGGTGAAGGAAGAATTGAGTTCAATGAGTCATTTAGGCTCCCTGTAGCACTGTTGAGGGACATGTCTGTCAAAAATTCAGATGCTGTTGTGTTCCAAAGGAATTGTTTGGAGTTCAACTTGTATGAGCCCAGAAGAGATAAGATTGTTAAAGGCCAGTTGCTGGCGACGGCCATCGTAGACTTGGCAGATTGTGGCATACTCAGAGAGACTTTGAGCATTAGTGCACCATTGAACTGCAAGAGGAGCTACAGAAACACTGATCAGTCTTTTTTGTTCATTAAAATCGAGCCGGTTGAAAAGAATCGAGCTAGGCCCTCGTTGAAGGACAGATTGTCAAAGGACAATAATGGCAGTGATTCTGTATCAGCATTGATGAATGGAGAATATGCTGAGGAAGCTGAGATTGCCTCCTTTACTGATGATGATGTTTCCTCTCATTCATCTTTAGCAGCAATTACTACTTCCCCTGAATCTAGTGGGTGTATGCCTCGTGAACATGAAGAGAATATACCAGCGCGAAACACTCGTAGGAATGACATGGAGCTTCCCTTGGCTTCAGAATCAAGGGTTGAAAAGATGAATATGATGCAACAGGATCCATATGAGAGACTGGAGAGGAGTTCATCCTATGTGCCATCTGATGTTAGGAGTCCAGTTAAAGTTCAAGCTTCTCTGACAAGCACTCCCAATAATGGTTCAGCGACACCCGATAAGCAATTTGTTTCCCCAAGTGCTGATTCTTCTTCCCAATCCTTGGAGGAAGTTTCCTTGAGCAAGTCCAGAAGCAGTGATCATGGAAATCTGGATCAGGAGGTTTGTGGAAAGGTTGCCAATGATAGAAATATAGTTACAGCTGTTCATACAAACAGTGATGAAAGTGCTTATTCAACCAACACTGCATCTCTAGATAGTAATTGCATCGATCCTGACTCTTTAAACTCTGCTGGTTCGGAAATTAACGGAAAGTTAAACGAGGGACATGAGGAAGCTGACAAATATTGCGTGGAGGATGGGGCAAGTGATAGATATTACTATAATCCCGTTCAGGACAAGCTTGGAAATGGAATGCTTCATTTTGATAAGCAAAATCATGTCGAAGATGAATCAGGGGCTCAAGGTGCCAAAGATCAAGTTTTATTGAGTAGTGTTACCAATTCTTTTGGTGGGTCAGATGTTGGTATGAAAGGAAATATTCTTAAATCTGAGAAGTTAAAGTATGTAAAATCTGTAAGGTCATCTGCAGACATTGCTAGGAGTATTTCACTTGGTAGCAATCATCATGCTGAAGTAAAGGAAAATGGCTTTAATGGAGATGCCCAAAACAGTGGAGGGAACATCAGAAGCAGTGACAAAAGAGAGGCTAAGATTTATCCAAGGGAAGCAAGAAATAACATTTTAGACAGCAAGGTTGAGCATTTGGAAAGCAAAATAAAGATGCTTGAAGGAGAGTTAAGAGAAGCTGCTGCAATTGAGGCTTCCTTATATTCAGTAGTTGCCGAGCATGGAAGTTCCATGGGTAAGGTTCACGCCCCAGCTAGGCGCCTTTCCAGGCTGTACCTTCATGCTTGTAAAGAAAATATTCAAGCTAGAAGGTCTGGGGCAGCTAAAAGTGCTATATCAGGATTAGTACTTGTTGCAAAAGCATGTGGAAATGATGTCCCAAGGTTAACATTTTGGTTGTCTAATTCTATTGTTTTAAGAACAATTATAAGCAAAACCACGAAAGATGTTGCACCATCAAATCCTGCTGTGTCTAGTACAAGAAGGAAAAGTGGAGAGGGGAATGGCAAGATAGCACAATCATTAATATGGAAGGGGTACTCTCATAAGAAAAGCGAAAATACAGCCATTGAATTTGGAGGTATTGGTAACTGGGATGACCCAAATGTGTTTACATCAGCACTGGAAAAGGTGGAAGCTTGGCTCTTCTCTCGCATCGTGGAATCTATTTGGTGGCAGTCTCTGACTCCACATATGCAGAAAAGCTATACGAAGATGTCTGGCACCTGTGATCAAGATCTGGGAAATTTATCACTTGATATTTGGAAGAATGCTTTTAGAGAAGCCTGCGAAAGGATCTGTCCACTCCGAGCTGGACGGCATGAATGTGGCTGTTTGTCAGTGCTGCCTAGATTGATAATGGAGCAGTGCATAGCGAGATTAGATGTTGCTATGTTCAATGCCATTCTTCGCGAGTCTGTTGATGACATTCCATCTGATCCTATATCTGATCCCATCAGTGATCCCAAGGTTCTCCCCATTCCGCCTGGTAAATCAAGCTTTGGTGCTGGAGCACAGCTAAAAACTGCGATTGGTAACTGGTCTAGATGGCTGACTGATCTATTTGGTATTGATGATGATGACTCACTTGAGAATAGAGATGATGATGAACTTGATAACAATGATGGACGCCAGAATACATCCTTCAAGCCCTTTCATCTTCTTAATGCACTAAGTGACCTCTTGATGCTTCCTAAGGATATGCTATTAAGTGAATCCATTAGGAAAGAGGTATGTCCTATGTTCAATGCTTCACAAATCAAGAAGATTCTAGACAATTTTGTCCCGGATGAGTTTTGCCCTGACCCAATTCCAACTGATGTGTTTGAAGCTCTAGATTCAAAGGATGATCTCGAGGACGGAAAAGACTCTGTCAACAACTTCCCATGCATTGCCGCTCCCATTGTATATTCACCTCCTCCAGCAACAACCATTGCAAGCATTACTGGGGATATTGGAAGTGAATCTCAGCTGAGAAGAAGCAAATCTTCTGTTGTCAGGAAGTCATACACCAGTGATGACGAGCTCGATGAGTTAAACTCGCCATTATCTTCAATATTATTTAGTGGCTCCCCATCCCCAGTATCAACAAAACCCAACTGGAAGAAAAAAGAAAGTCGCACCGAATCTGCTGTCAGATATGAACTCCTTAGGAATGTTTGGATGAACAGCGAGTGA 3147 0.4242 MKGKNRRSGGIVQLDYLIHIEEIKPWPPSQSLRSCRSVLIQWENGERSSGSTNIASPSLGSIVGEGRIEFNESFRLPVALLRDMSVKNSDAVVFQRNCLEFNLYEPRRDKIVKGQLLATAIVDLADCGILRETLSISAPLNCKRSYRNTDQSFLFIKIEPVEKNRARPSLKDRLSKDNNGSDSVSALMNGEYAEEAEIASFTDDDVSSHSSLAAITTSPESSGCMPREHEENIPARNTRRNDMELPLASESRVEKMNMMQQDPYERLERSSSYVPSDVRSPVKVQASLTSTPNNGSATPDKQFVSPSADSSSQSLEEVSLSKSRSSDHGNLDQEVCGKVANDRNIVTAVHTNSDESAYSTNTASLDSNCIDPDSLNSAGSEINGKLNEGHEEADKYCVEDGASDRYYYNPVQDKLGNGMLHFDKQNHVEDESGAQGAKDQVLLSSVTNSFGGSDVGMKGNILKSEKLKYVKSVRSSADIARSISLGSNHHAEVKENGFNGDAQNSGGNIRSSDKREAKIYPREARNNILDSKVEHLESKIKMLEGELREAAAIEASLYSVVAEHGSSMGKVHAPARRLSRLYLHACKENIQARRSGAAKSAISGLVLVAKACGNDVPRLTFWLSNSIVLRTIISKTTKDVAPSNPAVSSTRRKSGEGNGKIAQSLIWKGYSHKKSENTAIEFGGIGNWDDPNVFTSALEKVEAWLFSRIVESIWWQSLTPHMQKSYTKMSGTCDQDLGNLSLDIWKNAFREACERICPLRAGRHECGCLSVLPRLIMEQCIARLDVAMFNAILRESVDDIPSDPISDPISDPKVLPIPPGKSSFGAGAQLKTAIGNWSRWLTDLFGIDDDDSLENRDDDELDNNDGRQNTSFKPFHLLNALSDLLMLPKDMLLSESIRKEVCPMFNASQIKKILDNFVPDEFCPDPIPTDVFEALDSKDDLEDGKDSVNNFPCIAAPIVYSPPPATTIASITGDIGSESQLRRSKSSVVRKSYTSDDELDELNSPLSSILFSGSPSPVSTKPNWKKKESRTESAVRYELLRNVWMNSE* 1049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1789 1048 MobiDBLite consensus disorder prediction 287 320 - -
Lja1g1789 1048 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 2 1048 IPR021827 GO:0005643
Lja1g1789 1048 MobiDBLite consensus disorder prediction 224 249 - -
Lja1g1789 1048 Coils Coil 526 553 - -
Lja1g1789 1048 MobiDBLite consensus disorder prediction 216 254 - -
Lja1g1789 1048 ProSiteProfiles C2 NT-type domain profile. 4 162 IPR019448 -
Lja1g1789 1048 MobiDBLite consensus disorder prediction 494 517 - -
Lja1g1789 1048 ProSiteProfiles Dilute domain profile. 707 943 IPR002710 -
Lja1g1789 1048 MobiDBLite consensus disorder prediction 287 332 - -
Lja1g1789 1048 PANTHER EEIG1/EHBP1 PROTEIN AMINO-TERMINAL DOMAIN PROTEIN 2 1048 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1789 Lja-Chr1 20231694 20245220 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1789 - - gmx:100783487 1529.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1789 1 20231694 20245220 Lja1g1789 1 20231694 20245220 ECH