Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1781 ATGTCTCTGCTTGGCTTAATGCATTTTGCTATTTTTACCGTCCTCTGTCTTTTAGTCTTAACATGTGTGCCTTATCAAGCAGAGGCTTCAACTCGTTTCTTCTTTGGAAGAAAACCACATGTTGATGTTTTCGCTTCAGAGGATGGTATATGTGCCTCTTCTGTTCTTGTTCACGGATACAAGTGCCAGGAACTTGAGGTTACAACTGAAGATGGGTACATTCTGAGCCTGCAGAGGATTCCAGAAGGTCGAGCTCAAGTTAGTGGCGGTGGTAAGAAGCAGCGCCAGCCAGTGATATTACAGCATGGAGTACTAGTGGATGGCATGACATGGCTTCTGAACCCTCCAGAGCAGGACCTGCCATTGATTTTAGCAGACAATGGCTTTGACGTGTGGATTGCTAACACCAGAGGAACCAGATACAGCCGCCGACACACCTCATTGGACCCCTCTTCCCCGGCCTTTTGGAATTGGTCTTTTGATGAGTTGATTTCCTATGATCTACCTGCTGTGTTTGATTATGTGTTCAGCAAAACAGGGCAAAAGATTAATTACGTTGGCCATTCTCTGGGAACTTTGATAGCTTTGGCCTCCTTCTCTGAAGGAAAATTGGTTAACAAGCTGAAATCAGCAGCTTTGTTGAGTCCTGTTGCCTATTTGAGCCACATGCACACCCAACTTGCAGTTGTTGCAGCTAAGTCCTTTGTTGGTGAGATCACTACCCTATTTGGTCCGGCAGAGTTTAATCCCAAAGGATTACCTGTTGGTGCCTTTCTCAAGTCTCTTTGTGTTTACCCTGGGATAGACTGCAACGACTTGTTGACTGCAATAACTGGTGCAAATTGTTGCATCAATTCTTCAACTCTTGATCTATTCTTGTCAAATGAGCCTCAATCAACATCTACTAAGAACATGGTACACTTAGCTCAGATTGTTAGACGTGGGGTTCTAGCGAAATTCAATTATGTGAGACCAAGATATAATGTTATGCATTATGGAGAAATATACCCTCCAATCTATAACCTTTCCAACATCCCCCATGACCTTCCACTTTTCATTAGCTATGGGGGACAAGATGCACTTTCAGATGTTCGTGACGTTGAGACTTTACTTGATATACTTAAGCTTCATGATGTGGATAAGTTAAGTGTACAATTCATCAAGGACTATGCTCACGCTGACTTCATCATGGGGATCAACGCTAAGGACATAGTGTATAAAAATGTTATTTCATTTTTCAGTCATCAAGTTACGACCAAGGATGGGTACATTCTGAGCCTGCAAAGGATTCCTGAAGGACGAGCTGAAGCTAGTGGCAGTGGTAAAAAGCAGCCAGTGATATTACAACACGGAGTACTAGTGGATGGCATGACATGGCTTCTGAACTCTCCAGAGCAGGACCTGCCTTTGATTCTAGCTGATAATGGCTTTGATGTGTGGATTGCTAACACCAGAGGAACAGGACATAGTCGCCGACACATCTCATTAGACCCCTCTAACCCAGCCTTTTGGGATTGGTCTTTTGATGAATTGATTTCCTATGATCTACCTGCTGTGTTTGACTACGTGACCAACAAAACAGGGCAGAAGATTAACTATGTTGGCCATTCTCTGGGAACTTTGACAGCTTTGGCTTCCTTCTCTGAAGGGAATTTGGTTAACCAGCTGAAATCTGCAGCTTTGCTGAGCCCTGTTGCCTACTTGAGCCACATGAGCTCTGAATTTTTAGTTGTTGCAGCGAATACCTTTATTGATCAGATCATTTCCTTTGGTCAGGCGGAATTTGATATCAAAAGGTTACCTGGTAGTGCCTTTCTCAATTCTCTCTGCGTTCACCCTGGGGTAGACTGCAGCGACTTAATGACTGCAATAACAGGTGATAATTGTTGTCTGAATTCTTCAACCCTAAAACTATTCTTGTTGAACGAGCCTCAGTCGTCCTCAAGAAAAAATCTCATTCACTTGGCTCAGATTGTTAGACATGGGGTTCTTGCAAAATACAATTATGTGTTACCAGCGCATAATTTTATTCATTACGGACAAATAAGCCCTCCAGTGTATAACCTGGCCAACATTCCCCATGACCTTCCTCTTTTCATTAGCTATGGAGGCCGAGATGCACTTGCTGACGTTGGTGATGTTGCAACATTACTTGATATACTTAAGAACCATGATCAGGATAAGCTAAGTGTCCAGTTCATCAAGGACTACGCTCATGCCGACTTCGTCATGGGGTTCAATGCGAATGACATGGTGTATAAAAATATTATTTCATTTTTCAATCGTTGA 2289 0.4303 MSLLGLMHFAIFTVLCLLVLTCVPYQAEASTRFFFGRKPHVDVFASEDGICASSVLVHGYKCQELEVTTEDGYILSLQRIPEGRAQVSGGGKKQRQPVILQHGVLVDGMTWLLNPPEQDLPLILADNGFDVWIANTRGTRYSRRHTSLDPSSPAFWNWSFDELISYDLPAVFDYVFSKTGQKINYVGHSLGTLIALASFSEGKLVNKLKSAALLSPVAYLSHMHTQLAVVAAKSFVGEITTLFGPAEFNPKGLPVGAFLKSLCVYPGIDCNDLLTAITGANCCINSSTLDLFLSNEPQSTSTKNMVHLAQIVRRGVLAKFNYVRPRYNVMHYGEIYPPIYNLSNIPHDLPLFISYGGQDALSDVRDVETLLDILKLHDVDKLSVQFIKDYAHADFIMGINAKDIVYKNVISFFSHQVTTKDGYILSLQRIPEGRAEASGSGKKQPVILQHGVLVDGMTWLLNSPEQDLPLILADNGFDVWIANTRGTGHSRRHISLDPSNPAFWDWSFDELISYDLPAVFDYVTNKTGQKINYVGHSLGTLTALASFSEGNLVNQLKSAALLSPVAYLSHMSSEFLVVAANTFIDQIISFGQAEFDIKRLPGSAFLNSLCVHPGVDCSDLMTAITGDNCCLNSSTLKLFLLNEPQSSSRKNLIHLAQIVRHGVLAKYNYVLPAHNFIHYGQISPPVYNLANIPHDLPLFISYGGRDALADVGDVATLLDILKNHDQDKLSVQFIKDYAHADFVMGFNANDMVYKNIISFFNR* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1781 762 SUPERFAMILY alpha/beta-Hydrolases 415 762 IPR029058 -
Lja1g1781 762 SUPERFAMILY alpha/beta-Hydrolases 58 413 IPR029058 -
Lja1g1781 762 PANTHER LYSOSOMAL ACID LIPASE-RELATED 12 416 - -
Lja1g1781 762 PANTHER LYSOSOMAL ACID LIPASE-RELATED 415 762 - -
Lja1g1781 762 Gene3D alpha/beta hydrolase 46 413 IPR029058 -
Lja1g1781 762 Gene3D alpha/beta hydrolase 414 761 IPR029058 -
Lja1g1781 762 PANTHER TRIACYLGLYCEROL LIPASE 2 12 416 - -
Lja1g1781 762 PANTHER TRIACYLGLYCEROL LIPASE 2 415 762 - -
Lja1g1781 762 Pfam Partial alpha/beta-hydrolase lipase region 413 462 IPR006693 GO:0006629
Lja1g1781 762 Pfam Partial alpha/beta-hydrolase lipase region 58 114 IPR006693 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1781 Lja-Chr1 20115259 20153503 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1781 403 761 Acyl Lipid Metabolism Gene Families AT2G15230 39.058 9.17e-84 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1781 K01052 - gmx:100779460 662.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1781 1 20115259 20153503 Lja1g1781 1 20115259 20153503 ECH