Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1768 ATGCCTGTAATGGCAGAAGAGCCTCTCCTTGCACCCAACCCAGACCGCTTCTGCATGTTCCCAATCCAATACCCCGAAATCTGGCAAATGTACAAGAAAGCCCTCGCCTCCTTCTGGACCGCCGAAGAAGTCGACCTCTCCCACGACCTCCGCGACTGGGACTCCCTCAACGACGGCGAACGCCACTTCATCACCCACGTCCTCGCCTTCTTCGCCGCCTCCGACGGCATCGTCCTCGAAAATCTCGCCGGAAGGTTCATGAAAGAAGTCCAAATCGCCGAAGCACGCGCCTTCTACGGCTTCCAGATCGCCATCGAGAACATCCACTCCGAGATGTACAGCCTCCTGTTAGAAACCTACATCAAGGACTCCACCGAGAAACACCGCCTCTTCCACGCCGTCGAAACCATCCCCTGCGTCGCGAAGAAAGCCGACTTCTGCGCGATCTTCTGGTTGAAAAAACGCGGTCTCATGCCGGGGCTCACGTTCTCCAACGAGCTGATCTCACGCGACGAGGGGCTTCACTGCGATTTCGCGTGCTTGTTGTATTCTCTTCTGGAGAAGAAGCTTAGCGAGGAGCGCGTGAAGGGGATTGTGCGTGATGCGGTGGAGATTGAGAGGGAGTTTGTGTGCGACGCGCTGCCGTGTGCGTTGTTGGGGATGAATGGGGATCAGATGAGTCAGTATATTGAGTTTGTTGCGGATTATTGGCTTGAGAAGCTTGGGTGTGGGAAAGTGTATAATGTGGTGAACCCGTTTCCTTGGATGGAGTTGATTTCGTTGAAGGGGAAAACTAACTTCTTTGAGAAGCGCGTTGGAGAGTACCAGATTGCTTCTGTCATGAATGGTGATGGTGATGCCAGAGTCTTCAACATGGATGAGGAGTTTTGA 891 0.5376 MPVMAEEPLLAPNPDRFCMFPIQYPEIWQMYKKALASFWTAEEVDLSHDLRDWDSLNDGERHFITHVLAFFAASDGIVLENLAGRFMKEVQIAEARAFYGFQIAIENIHSEMYSLLLETYIKDSTEKHRLFHAVETIPCVAKKADFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLEKKLSEERVKGIVRDAVEIEREFVCDALPCALLGMNGDQMSQYIEFVADYWLEKLGCGKVYNVVNPFPWMELISLKGKTNFFEKRVGEYQIASVMNGDGDARVFNMDEEF* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1768 296 PANTHER RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN 145 296 IPR000358 GO:0009263
Lja1g1768 296 PANTHER RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN 3 146 IPR000358 GO:0009263
Lja1g1768 296 ProSitePatterns Ribonucleotide reductase small subunit signature. 105 121 IPR030475 -
Lja1g1768 296 Gene3D Ribonucleotide Reductase, subunit A 3 146 IPR012348 GO:0016491
Lja1g1768 296 PANTHER RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN 145 296 - -
Lja1g1768 296 PANTHER RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN 3 146 - -
Lja1g1768 296 Pfam Ribonucleotide reductase, small chain 16 147 IPR000358 GO:0009263
Lja1g1768 296 Gene3D Ribonucleotide Reductase, subunit A 147 276 IPR012348 GO:0016491
Lja1g1768 296 CDD RNRR2 17 261 IPR033909 GO:0009263
Lja1g1768 296 SUPERFAMILY Ferritin-like 4 277 IPR009078 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1768 Lja-Chr1 19977380 19978360 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1768 K10808 - atr:18438090 474.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1768 1 19977380 19978360 Lja1g1768 1 19977380 19978360 ECH