Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1760 ATGCAGGATTGGGGGCCAGTTTTTGTGTCAGTGGTGCTCTTCATTCTCCTCACTCCTGGGTTGCTGGTTCAGATACCTGGCAGAAGCAGGGTCGTAGAATTTGGCAACTTCCAAACTAGTGGATTATCCATCCTGGTCCATGCTGTTCTCTACTTTGCTTTTGTGTGCATTTTCTTGCTAGCTGTTAGGATCCACATATCCATCATTTTCCTGCGCTCAAAAGCAAGAAAAAGTAAGAAAGAAATGGCTGATTGGGCACCGGTATTGATTGGCGTGGTGCTGTTCGTGCTCCTCCAACCAGGGTTGCTGTTTTCCTTTCCGGGAAACGGGAAGCAGCTTGAGTTTGGTAGAATGAAGACTAACGGCAAAGCTATATTCATCCACACTCTCATCTTCTTCGCTCTCTACTCCATCCTCATCATTGCTGTTCGCGTTCACATCTACACCGGTTGA 453 0.4702 MQDWGPVFVSVVLFILLTPGLLVQIPGRSRVVEFGNFQTSGLSILVHAVLYFAFVCIFLLAVRIHISIIFLRSKARKSKKEMADWAPVLIGVVLFVLLQPGLLFSFPGNGKQLEFGRMKTNGKAIFIHTLIFFALYSILIIAVRVHIYTG* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1760 150 PANTHER OS05G0103400 PROTEIN 1 66 IPR021775 -
Lja1g1760 150 PANTHER OS05G0103400 PROTEIN 82 150 IPR021775 -
Lja1g1760 150 Pfam Protein of unknown function (DUF3339) 1 66 IPR021775 -
Lja1g1760 150 Pfam Protein of unknown function (DUF3339) 82 148 IPR021775 -
Lja1g1760 150 PANTHER TRANSMEMBRANE PROTEIN 1 66 - -
Lja1g1760 150 PANTHER TRANSMEMBRANE PROTEIN 82 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1760 Lja-Chr1 19885827 19893334 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1760 - - fve:101306079 232.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1760 1 19885827 19893334 Lja1g1760 1 19885827 19893334 ECH