Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lja1g1733 | ATGCCGGAGGAAGAACTAGTGGAGCTCAAGTTCCGTATCTACGATGGATCCGATATTGGACCCTTTCGTTACTCTCCTACTTCCACTGTCGCTATGCTCAAGGACAGGATCCTCGCTGAGTGGCCAAAAGACAAGAAAATTATACCAAAGGCCGCAAATGATATAAAACTGATAAGTGCTGGCAAAATTTTGGAGAACAACAAGACAGTTGGCCAGTGTAGAGTACCTTTTGGTGAGCTTCCCCCAGCAGTAATCACCATGCATGTTGTCGTCCAACCATCTCTGGCAAAAGCAAAAACAGAGAAAAAGCTGGATGAGGCGCCCAGAAAACATTTATGCGCATGTTCGATAATGTGA | 357 | 0.4538 | MPEEELVELKFRIYDGSDIGPFRYSPTSTVAMLKDRILAEWPKDKKIIPKAANDIKLISAGKILENNKTVGQCRVPFGELPPAVITMHVVVQPSLAKAKTEKKLDEAPRKHLCACSIM* | 119 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lja1g1733 | 118 | PIRSF | MUB | 1 | 118 | IPR017000 | - | |
| Lja1g1733 | 118 | Gene3D | - | 1 | 100 | - | - | |
| Lja1g1733 | 118 | SUPERFAMILY | Ubiquitin-like | 2 | 96 | IPR029071 | - | |
| Lja1g1733 | 118 | PANTHER | MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 4 | 1 | 118 | - | - | |
| Lja1g1733 | 118 | CDD | Ubl_MUBs_plant | 6 | 93 | - | - | |
| Lja1g1733 | 118 | ProSiteProfiles | Ubiquitin domain profile. | 7 | 75 | IPR000626 | GO:0005515 | |
| Lja1g1733 | 118 | PANTHER | UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN | 1 | 118 | IPR040015 | - | |
| Lja1g1733 | 118 | Pfam | Ubiquitin-2 like Rad60 SUMO-like | 6 | 116 | IPR039540 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lja1g1733 | Lja-Chr1 | 19361207 | 19367171 | Dispersed/Transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lja1g1733 | - | - | egr:104419120 | 221.861 |
Event-related genes