Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1732 ATGCATTTCCAAACAGCATCATGGGGAAGCTACATGTCACCCCGGACCACCGCCATGGTGATGTCTGGCGGCGGTGACCCACTGGAGCGCGTGGAGCGTCTGGCATCAGAGAGCGCGGTGGTGATATTCAGCGTGAGCACGTGCTGCATGTGCCATGCCATCAAGAGGCTCTTCTGCGGAATGGGAGTGAATCCAACGGTCCACGAGCTCGACGAGGATCCAAGAGGAAAAGACATGGAGAGAGCATTGATGAGGCTTCTTGGCACCTCCTCCGTCGTCCCCGTCGTCTTCATCGGCGGCAAGCTCGTCGGAACCATGGACAGAGTCATGGCTTGCCACATCAATGGCACTCTGGTCCCTCTCCTCAAAGAAGCTGGTGCTCTCTGGCTCTGA 393 0.5776 MHFQTASWGSYMSPRTTAMVMSGGGDPLERVERLASESAVVIFSVSTCCMCHAIKRLFCGMGVNPTVHELDEDPRGKDMERALMRLLGTSSVVPVVFIGGKLVGTMDRVMACHINGTLVPLLKEAGALWL* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1732 130 CDD GRX_GRXh_1_2_like 39 121 - -
Lja1g1732 130 ProSiteProfiles Glutaredoxin domain profile. 28 129 - -
Lja1g1732 130 PANTHER GLUTAREDOXIN-C5 4 129 - -
Lja1g1732 130 PANTHER GLUTAREDOXIN 4 129 IPR011905 -
Lja1g1732 130 SUPERFAMILY Thioredoxin-like 28 129 IPR036249 -
Lja1g1732 130 Pfam Glutaredoxin 40 103 IPR002109 -
Lja1g1732 130 TIGRFAM GlrX-like_plant: glutaredoxin-like family 31 130 IPR011905 -
Lja1g1732 130 Gene3D Glutaredoxin 26 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1732 Lja-Chr1 19345334 19345726 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1732 1 130 Miscellaneous Gene Families AT3G02000 62.590 6.81e-52 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1732 K03676 - gmx:100808865 229.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1732 1 19345334 19345726 Lja1g1732 1 19345334 19345726 ECH