Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1731 ATGGGTAGCACGTTCAATGCACAGATTTTAGTGGACAAACTAACCAAGCTGAATGGTTCACAGGCAAGCATAGAGACTTTGTCACATTGGTGCATTTTTCATATGAACAAAGCCAAACAAGTTGTTGAAACGTGGGCTAGACAATTTCATTCATCTCCTCGTGAGAAGAGATTGGCATTTCTGTATCTTGCAAATGATATCTTACAGAACAGCAGGCGAAAGGGTTCTGAATTTGTAGGCGAATTCTGGAAGGTTCTTCCAGGTGCTCTTCGAGATGTGATTGAAAATGGAGATGAGTTTGCGAAGAATGCTGCACTTCGGCTGATTGGTATATGGGAAGAGAGAAAAGTCTTCGGTTCTCGTGGTCAAATCCTCAAGGAAGGGATTGTTGGGAAAAATGTGGAAAACAATAGCCGTGATGCGAAACCAATGAACATGAAGCTGAGGCCATCTGCTGGGGATGCACTGGAGAAAATAGTTTCAGGTTATCGTGTTATTTATGGAGGGCAGACTGATGAAGATGCTGTGTTAAGCAAATGCAGGAATGCCATTAGTTTCCTTGAGAAAGCAGATAAGGAAATAGGTCATGATAGTGATTCAGGGAAACTCCAGGGACATAATGCCACACTAAAGGACTGCATTGAGCGATTAACATCAATTGAATCATCAAGAGCCAGCCTTGTGTCTCACCTGAGAGAGGCTCTCCAGGATCAGGAATTCAAGCTGGGTCAGATCCGTTGCCAGATTCAGGCTGCGCGTGTTCAGTCAGAACAGGCAGGTGGACAATTACTGAATGGCAACAATGTGCAGCCAATAACTGAGCAGAGCTCAAAGGAAATTCAAACCTCCATGGCCCCAGCAAGTTTTGTTTCTGCTGGTGACAGGGAGCAGTCCGCTCCATTAATGTATGCTCCACAAGTGTCATTTGCTCAAAATTCTGGACCTAATGAGGAAGATCCACGCAAGTCGGCAGCCGCCGCAGTGGCAGCAAAGCTGACTGCATCGACATCCTCTGCCCAGATGCTGTCTTATGTGCTGTCCTCATTAGCATCAGAAGGCGTCATAGGCAATCCAATTAGAGATTCCTCTGCCGATTATCAACCTGAGAAGAGGGCCAAGCTCGAGAACGACCAGTCATCTTATATGCCATCTCAGAGTTCTCAACAACCACAACTTCCTCCCTTTTCGTTCTCTGAATCTATCCTACACAATGCGGCATCTACAACCAACCAGCAATCTACTCCCAATGAACCACCACCTCCACCCTCATCATCTCCTCCCCCGTTGCCGCCACTGCCACCAATGGCACAGTACCCTGTGCCGCAGTACATGCAGACTTCTGGATCTGTTAACAATATGACATACAGTTATAGCGTGATACAACAACCATCAATGGCAGCATTTCCAGCTGTTGGGCCTTCTCTGAATAATGCCTCTTCTTTTGCACCTCCTATGAATGCATATCAGGGTTTTCAGGGTCCAGATGGGAATTACTATAACCATCCCTCATCAATGCCTATGACTCCTATCTCTCGGCAGTAG 1542 0.4617 MGSTFNAQILVDKLTKLNGSQASIETLSHWCIFHMNKAKQVVETWARQFHSSPREKRLAFLYLANDILQNSRRKGSEFVGEFWKVLPGALRDVIENGDEFAKNAALRLIGIWEERKVFGSRGQILKEGIVGKNVENNSRDAKPMNMKLRPSAGDALEKIVSGYRVIYGGQTDEDAVLSKCRNAISFLEKADKEIGHDSDSGKLQGHNATLKDCIERLTSIESSRASLVSHLREALQDQEFKLGQIRCQIQAARVQSEQAGGQLLNGNNVQPITEQSSKEIQTSMAPASFVSAGDREQSAPLMYAPQVSFAQNSGPNEEDPRKSAAAAVAAKLTASTSSAQMLSYVLSSLASEGVIGNPIRDSSADYQPEKRAKLENDQSSYMPSQSSQQPQLPPFSFSESILHNAASTTNQQSTPNEPPPPPSSSPPPLPPLPPMAQYPVPQYMQTSGSVNNMTYSYSVIQQPSMAAFPAVGPSLNNASSFAPPMNAYQGFQGPDGNYYNHPSSMPMTPISRQ* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1731 513 MobiDBLite consensus disorder prediction 493 513 - -
Lja1g1731 513 MobiDBLite consensus disorder prediction 496 513 - -
Lja1g1731 513 CDD CID_RPRD_like 8 129 - -
Lja1g1731 513 PANTHER OS01G0925000 PROTEIN 1 513 - -
Lja1g1731 513 SMART 558neu5 9 130 IPR006569 -
Lja1g1731 513 MobiDBLite consensus disorder prediction 414 438 - -
Lja1g1731 513 Pfam CID domain 9 120 IPR006569 -
Lja1g1731 513 ProSiteProfiles CID domain profile. 2 134 IPR006569 -
Lja1g1731 513 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN 1 513 - -
Lja1g1731 513 MobiDBLite consensus disorder prediction 372 442 - -
Lja1g1731 513 MobiDBLite consensus disorder prediction 377 413 - -
Lja1g1731 513 Gene3D - 2 128 IPR008942 -
Lja1g1731 513 SUPERFAMILY ENTH/VHS domain 8 117 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1731 Lja-Chr1 19309565 19317553 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1731 K15559 - gmx:100808335 720.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1731 1 19309565 19317553 Lja1g1731 1 19309565 19317553 ECH