Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1720 ATGGGCTTGCCTCAAATACCCTCAAGTGAATCTGCTGAAAAATTTGCACCTGTGAGTGCAGTTTTAAATAGCTCACCACACTTTTCTGATGGAAGTCCTTCTGCTATAAGCAGCATGAGCAGTGGGAATGCTCATGATGGGTCGGTTGCACGTAATCTGGCATCATCATTTGATGATTGTCCAAATAATTCCTCATTAGAACATTCAAATGTTTCTGACAAGGCATTTTATAGAGGAGCCGTCGAAGTCACTTCCAATGTCCACAGTTTGAAGATTGATTCAACAGGAGGTACTCTTTTTGCTTCACACAGTGGACGGAATGTTCATACTCCTGCATCAAGGGTTGTGGGTTTCGAATCAGGCCGAACAAGTTCTTTAAATGATGGGTTGTCTGAAGTTCTAGCTGCAAATCTCAATTCTTCAGCTTTTATTGATATCTCTGCCAATGACACTGAATCTGCCAATTCGTTGGTCAGGAAGCGGCTTTTATCCCCATTGAGCAGTATGCTCTCCCCAGGTCATTTCAAAGGTGATTCTCTTGACCTTGGTTGCAGAAGTACTGACACTGGCTCTCTTGTTAAGAATGATAATATCAGAAATTCCATTGCACAGGATAATAAGAAGGCAAATATTGGAAACAAAGGCAGTTATACAATGCCTTCTTGGTCCTTGACTAATTGCTTTGAGCAAAAAAACCTGCCACACAGTACAGAGTCCATGTTTCCATATGATGGTCCTTTGCATGAAATTAGAGGACTACTATCCCAGGGTAGTTTACCTGCGTCTAGAATTGATCTCATAAGAGAATCAAGTCAGGTCAAATCTCAAAGTGGTGTAATATCCATGTCTCCTAAAAGTGTGAGCACTCCTCTTTCCTTTTCACCTCTTGGTCCTAAATTTTCTGAAAGAATAGAAACTGCTGGACGATGTAGGAGTGTTGCTGAAGAGTTAAAGAATTGCAATATAACTTTAAGGAATATTGAGCAATCACTTGTCAATTCAAACTCTTGCCTAATGTTAAATCATAATAAAGATGATGATTTAGGACTTGCACGGAAATCTTTTGAAGATGCTGAATTCTTTTGCAAAGACTTTTATCCATCTTCTCTGGATGATATTGCTCATGTGAGTTGGCCACTATCTCAAGAATCAGCTCTAATCTCTAACTCCATGAGGTTCACTAGAAGTTTGAGTGGACTTTCAGTAAGGAGGTCTTTGGTTGGTTCATTTGAGGAGTCTCTTTTATCTGGCCGTTTCTTGTCTGGGCACCTTAGTAAGAAAATTGATGGTTTTCTTGCTGTGCTGAGTGTTACTGGGGGAAGTTTTTCTCCTAAATCGCAAAAGCTACCATTTTCTGTTACTAGCGTGGATGGAGAAAGCTATCTATTGTATTATGCATCAATAGATCTTGCAGGAAATTCTTCATATAACAAGTTTAGAGGCCAACTGCTAAAACGAGGGCCCAAAATTGATGATTCTCAAAGTGACAAAAGTCGATTGCGTATACCAATGAAAGGACGGATTCAACTGGTGCTAAGCAATCCAGAGAAGACTCCCCTCCACACCTTCTTTTGCAACTATGATTTGAGCGACATGCCAGCCGGTACCAAAACATTCTTGCGCCAGAAAGTCACCCTTGGTTCTTCCACTTCCTCTCAGCTAAAACACGAGCCAACAGGTTTGGACAGTGGAATTGACAAGGGGAGCGGTGAAGTGATGCGCACAGATCAGAGAAGCGTCAAGGGTTCTAGCTTGGTGAATTCTGTAAATGAAGAGGACCCTTCCAAGAAATCTCCAAACATGAAAGTGTTGGGAGTCCCTTCTTCAGTAAAGCTTGATCATGGATGCATTACTGATAAACTTGAAAGGAATGATCGCAAGGGGTGCTGGGATAAAACATGTGATGAATCAGGGAAATCATTAAATTCCTGTTCAAAGGTCAAAGAGAATTCTAATATTGTTGGTCCACTTCGTTATGCTCTCCACCTCCGATTTATTTGCCCTTTTCCCAAGAGGACCAATAGATCAGTTCAAAAATGCAGATATAATTCTGTCCCTGAAAAAGCTGGATTGGACATAGAAGGGGAACGTAAATTCTACTTATGTAATGATTTAAGGGTTGTGTTTCCTCAACGTCATACAGATGCTGATGAGGGAAAGTTGAACGTGGAATACCATTTCCCTGAAGATCCAAGATACTTTGACATCAACTGA 2214 0.4083 MGLPQIPSSESAEKFAPVSAVLNSSPHFSDGSPSAISSMSSGNAHDGSVARNLASSFDDCPNNSSLEHSNVSDKAFYRGAVEVTSNVHSLKIDSTGGTLFASHSGRNVHTPASRVVGFESGRTSSLNDGLSEVLAANLNSSAFIDISANDTESANSLVRKRLLSPLSSMLSPGHFKGDSLDLGCRSTDTGSLVKNDNIRNSIAQDNKKANIGNKGSYTMPSWSLTNCFEQKNLPHSTESMFPYDGPLHEIRGLLSQGSLPASRIDLIRESSQVKSQSGVISMSPKSVSTPLSFSPLGPKFSERIETAGRCRSVAEELKNCNITLRNIEQSLVNSNSCLMLNHNKDDDLGLARKSFEDAEFFCKDFYPSSLDDIAHVSWPLSQESALISNSMRFTRSLSGLSVRRSLVGSFEESLLSGRFLSGHLSKKIDGFLAVLSVTGGSFSPKSQKLPFSVTSVDGESYLLYYASIDLAGNSSYNKFRGQLLKRGPKIDDSQSDKSRLRIPMKGRIQLVLSNPEKTPLHTFFCNYDLSDMPAGTKTFLRQKVTLGSSTSSQLKHEPTGLDSGIDKGSGEVMRTDQRSVKGSSLVNSVNEEDPSKKSPNMKVLGVPSSVKLDHGCITDKLERNDRKGCWDKTCDESGKSLNSCSKVKENSNIVGPLRYALHLRFICPFPKRTNRSVQKCRYNSVPEKAGLDIEGERKFYLCNDLRVVFPQRHTDADEGKLNVEYHFPEDPRYFDIN* 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1720 737 MobiDBLite consensus disorder prediction 576 594 - -
Lja1g1720 737 PANTHER GH03947P 1 737 - -
Lja1g1720 737 MobiDBLite consensus disorder prediction 547 603 - -
Lja1g1720 737 SMART DUF4210_2 406 465 IPR025261 -
Lja1g1720 737 MobiDBLite consensus disorder prediction 27 47 - -
Lja1g1720 737 Pfam Domain of unknown function (DUF4210) 406 452 IPR025261 -
Lja1g1720 737 Pfam Chromosome segregation during meiosis 657 736 IPR033473 -
Lja1g1720 737 PANTHER MEIOSIS CHROMOSOME SEGREGATION FAMILY PROTEIN 1 737 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1720 Lja-Chr1 19128474 19137075 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1720 - - lja:Lj1g3v3892330.1 1248.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1720 1 19128474 19137075 Lja1g1720 1 19128474 19137075 ECH