Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1717 ATGGCGTGGGACTTGGAATTGTTTTACATCATCAGAAACTGGGAAGTTGCGGACCGGACATCATTTACAGACCTTGTGAAACTAGTTGAGAGAACAGTTAAGTTAGAAAATCAACGTTCACCAAATAGACCCATATATCTTGTTGGAGAATCTTTGGGAGCATGCCTCGCGCTGGCTGTTGCAGCCCTTAACCCTGGCATTGATCTCATACTAATTTTGGCGAACCCAGCTACTTCATTCAGCAGGTCACAGTTGCAACTTCTTACACCATTATTGGAAGCTTTTCCTGGTCCACTCTCTCCTGGCCTGCCTAACATTCTTAGTTTGACAGGAGGTGACCCTCTAAGGATGGTGTTGGATAATTTGGTGAAAGGACTTCCTCTACAAAATACAGCAAGAGAGATAATGGAAGATTTTACTACCCTCTCCTCCTCTCTTCCTGTTCTTGCTGACATATTACCAAAAGAAACACTTCTGTGGAAACTAAAGATGCTGAAGGCAGCTTCTGGGTATGTCGATGCACGTCTTCATGCAGTCAAGGCTCAGTCTTTAATACTTTGCAGTGGAAATGATCAGTTACTGCCTAGTCAACATGAAGGTCAAAGACTATTTCAGTTATTGCCTAGATGCGAGCTTCGTAAATTTGATAATGGTGGTCATTTCCTATTCCTGGAAGGTAATGTTGACCTGGTAACGATTCTCAAGGGAACTTCTTACTACCGCCGTGGCAAGTATCATGACTACACATCGGATTTTATACTGCCAACACCTGATGAAGCCAAAAAAATAATTGAATCATACAGTTTGCTTAACGTTGCCACAAGTGCTGTAATGCTTTCAACTTTGGAGGATGGAACAGTTGTAAAAGGCCTTGCTGGAATTCCTTCAGAGGGGCCTGTTTTGTTAGTTGAATACCACATGTTGCTGGCATTGGATTTAGTTCCCTTGGTTTCTCGAATTTTTACCGAAAGAAATATCCTTGTTCGAGGCGTGGCACATCCCTTGTTTTTTGAGAGAAGGAAAAATGGTATGCTGCCAGATCCATCTTCTTTTGACTCATTTAGAATCGCGGGCGCTGTTCCTGTAGCAGGAACTAACCTCTTCAAGCTTTTATCTTCCAAGTCTCATGTCCTATTATTTCCTGGAGGGATACGTGAGGTTCTTCACAGGAAGGTAGTTATTGATTATGATGACTTGGCGAAGATTCCTTACTTTAGGTCTGAAATAGAAAGTCTTACAAATGAGTCTCTGCAGTTGAGGGCTGATGTTAGTGGTGAGGTGGCAAATCAGCCAGTGCATTTGCCTGGAATTTTGCCTAAAGTTCCGGGCAGGTTCTACTATTATTTTGGAAAACCATTTGAAACAGAAGGAAGGAAACAGGAACTTAGGGACAGGGAAAAATCTGAAGAATTATATTTTCAAGTGAAATCTGAGGTTGAGAGATGTATTGCTTATTTAAAGGAAAAACGAGAAAGTGATCCCTACAGAAGTATACTGTCACGGCTATTATACCAGGCCACACATGGTTTTGAGTCTTAG 1539 0.4191 MAWDLELFYIIRNWEVADRTSFTDLVKLVERTVKLENQRSPNRPIYLVGESLGACLALAVAALNPGIDLILILANPATSFSRSQLQLLTPLLEAFPGPLSPGLPNILSLTGGDPLRMVLDNLVKGLPLQNTAREIMEDFTTLSSSLPVLADILPKETLLWKLKMLKAASGYVDARLHAVKAQSLILCSGNDQLLPSQHEGQRLFQLLPRCELRKFDNGGHFLFLEGNVDLVTILKGTSYYRRGKYHDYTSDFILPTPDEAKKIIESYSLLNVATSAVMLSTLEDGTVVKGLAGIPSEGPVLLVEYHMLLALDLVPLVSRIFTERNILVRGVAHPLFFERRKNGMLPDPSSFDSFRIAGAVPVAGTNLFKLLSSKSHVLLFPGGIREVLHRKVVIDYDDLAKIPYFRSEIESLTNESLQLRADVSGEVANQPVHLPGILPKVPGRFYYYFGKPFETEGRKQELRDREKSEELYFQVKSEVERCIAYLKEKRESDPYRSILSRLLYQATHGFES* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1717 512 Pfam alpha/beta hydrolase fold 37 226 IPR000073 -
Lja1g1717 512 PANTHER FAMILY PROTEIN, PUTATIVE-RELATED 15 391 - -
Lja1g1717 512 PANTHER FAMILY PROTEIN, PUTATIVE-RELATED 391 511 - -
Lja1g1717 512 SUPERFAMILY alpha/beta-Hydrolases 19 229 IPR029058 -
Lja1g1717 512 PANTHER TRANSMEMBRANE PROTEIN 68 15 391 - -
Lja1g1717 512 PANTHER TRANSMEMBRANE PROTEIN 68 391 511 - -
Lja1g1717 512 Gene3D alpha/beta hydrolase 12 232 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1717 Lja-Chr1 19034457 19042255 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1717 - - lja:Lj1g3v3902480.3 851.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1717 1 19034457 19042255 Lja1g1717 1 19034457 19042255 ECH