Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1706 ATGCCAATGGCGGATCCAATCTCGAAGGCTCTGATTCTCCTTTCGATCGTAGCTTCGTTGTTGCTATGCTCCCACGCTTCATCCTCCTCTGACGTTCCCTTCATCGTCGCGCACAAGAAGGCCTCCCTCAACCGGCTCAAGTCTGGCGCTGAAAGGGTCTCCGTCTCCATCGATATCTACAACCAAGGATCTTCGACTGCATATGACATAAGTCTAGCAGATGATACTTGGCCAAGTGATCTTTTCAGTATAATCAGTGGCAGCACATCGAAATCATGGGAAAGGCTTGATGCGGGTGGCATCCTCTCCCACACATTTGAGCTGGAGGCAAAAACAAAGGGAGTATTCTCTGGTCAACCAGCTGTCATCAAGTTCCGCATCCCCACTAAGTCTGCTTTACAGGAGGCATTCTCAACTCCCATATTGCCTTTAGATGTTCTTGCTGACAGACCTCCTGAGAAGAAGTTTGAATGGGCTAAGAGATTGCTGGCTAAGTATGGATCTCTATTCTCGGTGATCTCCATCATGGTTCTGTTTGTGTACCTGGTCGCAACACCATCGAAATCGGGTGCCAAAGGAAGCAAGAAGAAGCGTTAA 597 0.4858 MPMADPISKALILLSIVASLLLCSHASSSSDVPFIVAHKKASLNRLKSGAERVSVSIDIYNQGSSTAYDISLADDTWPSDLFSIISGSTSKSWERLDAGGILSHTFELEAKTKGVFSGQPAVIKFRIPTKSALQEAFSTPILPLDVLADRPPEKKFEWAKRLLAKYGSLFSVISIMVLFVYLVATPSKSGAKGSKKKR* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1706 198 PANTHER BNAA02G28300D PROTEIN 18 198 - -
Lja1g1706 198 Pfam Translocon-associated protein beta (TRAPB) 20 195 - -
Lja1g1706 198 PIRSF TRAP-beta 9 198 IPR008856 GO:0005783|GO:0016021
Lja1g1706 198 PANTHER TRANSLOCON-ASSOCIATED PROTEIN, BETA SUBUNIT PRECURSOR TRAP-BETA SIGNAL SEQUENCE RECEPTOR BETA SUBUNIT 18 198 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1706 K13250 - gmx:100500066 311.997
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1706 1 18811425 18814361 Lja1g1706 1 18811425 18814361 ECH