Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1693 ATGAGCAGTTGGAGAAGTCTTCTTCTTCGAATCGGCGACAAGAGCCCCGAATATGGAGCTTCCTCCGACTTCAAAGACCACATTGAAACCTGCTTTGGCGCACTTCGCCGAGAACCTGACCTCTCCCAGGATGAGATTTTGGAGTTCGTTCTCGCATGTTCCGAGCAATTGCCTCACAAGATTCCTTTGTATGGAACCCTGATTGGCTTGATTAACTTGGAAAATGAGGACTTAGTGAAGAAGTTTGTGGAGAAAACACAAACAAAATTTCAGGATGCATTAGATTCTGGAAACTGCAACGGAGTTCGAATTCTGATGCGGCTTATAACTGTTATGATGTGTAGTAAGGTTGTTCAGCCTGGCTCTTTGGTGGGCGTCTTTGAAACATTTTTATCGTCAGCTGCCACAACAGTTGATGAAGAAAAAGGAAATCCGTTATGGCAGCCATGTGCTGACTTTTACATAACTTGCATTTTATCATGCCTCCCATGGGGTGGGGCAGAACTTGTTGAGCAAGTTCCTGAAGATATTGAGAGAGTGATGGTTGGTGTTGAAGCTTACTTTAGCATCAGAAGGCGTACTTTTGACACTGGTTTATCCTTCTTTGAGAGCGATGTTGAAATTGAGAGAGATGTTAACCACAAGGATTTTTTGGAAGACTTGTGGGACAGAATACAGGGTTTATCAAGCAATGGATGGAAAGTTGAAAGTGTTCCAAGACCTCATCTTTCATTTGAAGCTCAGCTGGTTGCTGGGAAGTCCCATGAATTTGGGCCAATAAGCTGCCCCAACTTACCAAACCCGCCTTCAGATCCATCTGGCATATCTATTGGTAAACAAAAGCATGAGGCAGAATTAAAATATCCTCAACGGATGCGTCGGTTAAACATATTTCCTTCTAGTAAAACTGAGGATATACAGCCAATAGATCGATTTGTTATGGAAGAGTATCTGCTAGATGTGCTTCTGTTCTTCAATGGCTGTCGAAAGGAATGTGCTTTTTTCATGGCTGGCCTGCCAGTTTCCTTCAGATATGAGTTCCTGATGGCAGAGACAATATTCTCACAGCTGCTGATGTTACCACAGCCGCCTTTCAAACCGGTGTATTACACACTGGTTATTATTGATCTTTGCAAGGCACTTCCTGGAGCTTTTCCTGCAGTTGTAGCAGGAGCTGTCCGTGCTCTCTTTGAGAAGATTGTTGATTTGGATATGGAGTGTCGGACACGCCTAATCCTTTGGTTCTCACACCATTTATCAAACTTTCAGTTCATCTGGCCATGGGAAGAGTGGGCTTTTGTCTTAGACCTTCCGAGGTGGGCCCCTCAACGTGTCTTTGTTCAGGAGGTTTTGGAGAGAGAAGTTCGCTTGTCATACTGGGAGAAAGTTAAGCAGAGCATTGAAAATGCACCTGGTTTAGAAGAGTTGCTTCCTCCAAAGGGTGGAACAAACTTCAGTTTTGGTGCTGAAGATGATAAAGAAAACAATGAACTTGTACTGTCTGGAGAGCTCAATAACATGGTTAAAGGGAAGGTTCCTGTCCGTGAAATAATCTCATGGATTGATGAAAGTGTGTTTCCAAATAATGGTCTAGAAGTTACTCTCAGAGTGGTCGTACAAACTCTTCTTAATATTGGATCCAAAAGTTTCACTCATTTAATAACTGTGTTAGAGAGATACGGGCAAGTCATTGCAAAAGTATGTCCTGATGAGGATAAGCAAGTCATGCTGATAGCTGAAGTGAGTTCTTTCTGGAAAAGTAACACCCAAATGACAGCAATAGCAATTGACAGGATGATGGGCTACCGACTTGTATCAAATCTAGCTATTGTGAGATGGGTCTTCTCAGCAGAAAATACAGAGCTATTTCACACATCAGATCGTCCATGGGAGGTTCTTAGAAATGCAGTCAGCAAGACATACAATCGTAATTCTGATCTAAGAAAGGAGATATTGGCTCTTAAAAAGAATATTTCATCAGCTGAAGAAATTGCCAAGGAGGCAAAAGCAGAGTTAGATGCTGCAGAGTCAAAACTCACACTGGTGGATAGTGAACCGGTTCTTGGTGAAAACCCTGTTAGGTTGAATAGATTGAAATTACGTGCTGAAAAATCAAAGGAGGAGGTGGTGTCTCTTCAAGAATCTTTAGAAGCTAAGGAAGCTCTTCTTGCACGAGCTGCTGGTGAAAATGAGGCATTGTTTGTCTTGTTGTACAAAAGCTTCTCAAATGTATTGAAGGAGCGTCTTCCGAAGGGATCGGAAGCTAGAACACTGCGTGAATTGAAGTCTGTACAAGTTGATGAGATGGCAGTGGACCCTGAAGAACCATCATCAATGGAATTAGACAATGAGAACCAGAAACCTGAAGACAGTCAGTCAAATGGTGGGAAGAAAAGTAATGCTTATAATATAGGTGAAAAGGAGCAGTGGTGTATCACTACTTTGGGCTACGTGAAGGCCTTTTCCAGACAGTACGCTTCTGAGATATGGCCCCTTATCGAAAAGTTGGATGCAGAGGTGATGACAGAAGAGGTACCCCCTCTTTTCCGGTCAGCTGTTTATTCTGCTCTTCGAAGACCAATTAATGACGCTTGA 2595 0.4277 MSSWRSLLLRIGDKSPEYGASSDFKDHIETCFGALRREPDLSQDEILEFVLACSEQLPHKIPLYGTLIGLINLENEDLVKKFVEKTQTKFQDALDSGNCNGVRILMRLITVMMCSKVVQPGSLVGVFETFLSSAATTVDEEKGNPLWQPCADFYITCILSCLPWGGAELVEQVPEDIERVMVGVEAYFSIRRRTFDTGLSFFESDVEIERDVNHKDFLEDLWDRIQGLSSNGWKVESVPRPHLSFEAQLVAGKSHEFGPISCPNLPNPPSDPSGISIGKQKHEAELKYPQRMRRLNIFPSSKTEDIQPIDRFVMEEYLLDVLLFFNGCRKECAFFMAGLPVSFRYEFLMAETIFSQLLMLPQPPFKPVYYTLVIIDLCKALPGAFPAVVAGAVRALFEKIVDLDMECRTRLILWFSHHLSNFQFIWPWEEWAFVLDLPRWAPQRVFVQEVLEREVRLSYWEKVKQSIENAPGLEELLPPKGGTNFSFGAEDDKENNELVLSGELNNMVKGKVPVREIISWIDESVFPNNGLEVTLRVVVQTLLNIGSKSFTHLITVLERYGQVIAKVCPDEDKQVMLIAEVSSFWKSNTQMTAIAIDRMMGYRLVSNLAIVRWVFSAENTELFHTSDRPWEVLRNAVSKTYNRNSDLRKEILALKKNISSAEEIAKEAKAELDAAESKLTLVDSEPVLGENPVRLNRLKLRAEKSKEEVVSLQESLEAKEALLARAAGENEALFVLLYKSFSNVLKERLPKGSEARTLRELKSVQVDEMAVDPEEPSSMELDNENQKPEDSQSNGGKKSNAYNIGEKEQWCITTLGYVKAFSRQYASEIWPLIEKLDAEVMTEEVPPLFRSAVYSALRRPINDA* 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1693 864 PANTHER CAP BINDING PROTEIN 2 860 IPR027159 GO:0000339|GO:0005846|GO:0006406
Lja1g1693 864 Pfam MIF4G like 343 467 IPR015172 GO:0016070
Lja1g1693 864 Coils Coil 695 722 - -
Lja1g1693 864 SUPERFAMILY ARM repeat 2 296 IPR016024 -
Lja1g1693 864 Gene3D - 490 856 - -
Lja1g1693 864 MobiDBLite consensus disorder prediction 766 801 - -
Lja1g1693 864 Pfam MIF4G domain 21 192 IPR003890 GO:0003723|GO:0005515
Lja1g1693 864 Coils Coil 644 685 - -
Lja1g1693 864 SMART if4_15 1 229 IPR003890 GO:0003723|GO:0005515
Lja1g1693 864 Gene3D - 296 480 - -
Lja1g1693 864 SUPERFAMILY ARM repeat 478 850 IPR016024 -
Lja1g1693 864 SUPERFAMILY ARM repeat 294 478 IPR016024 -
Lja1g1693 864 Pfam MIF4G like 503 828 IPR015174 GO:0016070
Lja1g1693 864 Gene3D - 3 268 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1693 K12882 - gmx:100811738 1473.37