Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1687 ATGCAGACAGCTTTAACCTCTGCAGCAACTCCCAACGTTGTGCCTTTGACACCTTCAAAGAGTGTCTCCCATCTTACCAGCTTCCCTGCCAAATTGACTGGCTCACTTGCTCCACCTCGTTTCACTGCAATCAAAGTTGCAACTGTCAACTATGACACTTCAACTGTGGATTACACCTCTGCCTTCTCAGTGTTTCCAGTAGAAGCTTGTGAGACAATTGGAGGGGATGCCTGTTTGGCAGAGATGTACCCTGAAGTGAAGCTGAAGCCAGAGGCTAGAAACAACACACCACGAGATGCTTCAGAGAACGTTGAGAGAGAGTATCTTGAATACAATGATCCAAAGACGGTTTTCCAAGCAGAGGCTTGTGATGATCTTGGAGGAATTTTCTGTGAGCTTGAGTATCAGAAGGGTGTCTACTAG 423 0.4657 MQTALTSAATPNVVPLTPSKSVSHLTSFPAKLTGSLAPPRFTAIKVATVNYDTSTVDYTSAFSVFPVEACETIGGDACLAEMYPEVKLKPEARNNTPRDASENVEREYLEYNDPKTVFQAEACDDLGGIFCELEYQKGVY* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1687 140 PANTHER LIGHT-REGULATED PROTEIN 1 140 - -
Lja1g1687 140 PANTHER LIGHT-REGULATED PROTEIN 1, CHLOROPLASTIC 1 140 IPR009856 GO:0009507
Lja1g1687 140 Pfam Light regulated protein Lir1 1 132 IPR009856 GO:0009507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1687 Lja-Chr1 18613269 18614813 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1687 - - lja:Lj1g3v3904290.1 277.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1687 1 18613269 18614813 Lja1g1687 1 18613269 18614813 ECH