Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1686 ATGAGACAGCAGAAGCAGGTGAACAGCAACAACCATAGCAGGCAACCGAGGATCCTATATTTGGTGTTTGCCGCTGCACTCTTCTCCCTCATCCTCTTCGCTATCCAATCTTCTTTCTTCTCTGGCTCCCTCTACTCAGATCGTAACTCTGAGACAATTCGTATCTTGTCCCAGTTTCAGTCCTCTCTTCAGCAATGTGTCGCGAATAGGGGGCTTGGACTCACTGCACATATTATTGACCATTGTACGTTGATCCTTAAATTCCCTAAAGGCACCAACAGCACTTGGTATAATGCGCAGTTTAAAAAGTTTGAGCCTTTGGAGTTCCAGTATGATGTTTGTGAGGCAATCATATTGTGGGAACAGTACCGTAACATGACTACGGTGTTGACCAGAGAGTATCTTGATACTCGTCCTGATGGTTGGTTAAAGTATGCTCCAAAAAGGATAGCACAAGTAGGGGTAAAGAAGTGCACTAATAGGACTATTTGTGAAGAGAACCTCAATATATTATTACCTGCAAAACCCCCCTTTCATCCGCGGCAGTTTCGTACTTGTGCTGTTGTTGGAAATTCTGGGGACCTTCTGAAGACAGAATTTGGAGAAGAAATTGATAGTCATGATGCTGTTTTTCGAGAAAATGAGGCCCCTGTTAATCAGAAATATGCCAAGCACGTTGGTCTTAAGAGGGATTTCCGTCTAGTTGTAAGAGGTTCTGCTGTTAACATGGTCCCTATTCTAAATGGTTCTGATGATGAGGTATTCATAATCAAAAGTATGACACATAAAGAAATCAATGCGGTTATAAAGACTGTACGAAATCCAGTCTATCTCTTCCAAGGTATTGTACTACGTCGAGGTGCCAAAGGAACTGGAATGAAATCTGTTGAATTAGCGCTCTCCATGTGCGATGTTGTTGATATATATGGTTTCACTGTTGACCCAGGATACAGTCTATGGACAAGATACTTCACTGCTCCCAGGAAGGGACACAATCCACTTCAAGGAAGAGCATACTACCAACTTCTAGAATGTCTTGGAGTAATCAGGATTCACTCCCCCATGAGATCTAAGAGGAGGCAAGACTGGTCAGATGTGCCTAGTAGTGAAATGATAAGTCAAGCACATGCAGCCGCTTTGCGCTTGAAAAAGAGTCCAGCTGCTCAGCTCGGGCAGTTCGGCAATTGTAAGGTGTGGGGCAACGTGGACCCGGACAAAAGTGGACCTATCTCGGGATCACCAGACATGAGTGATGTCAGGAAGTATTCAAATTACAGTAAATGGGAAGTCATGCCTATTGAGAGTTTGAGGAAAGATGCACAGGATCACTATAAGCAGATGCAAGGGGTGTCTATATATAAATTGGACGGCAATAGGTTGGATGACCTAGTATGTGTAAGACATTCCTTAAAATCTGATGTGTAA 1425 0.4337 MRQQKQVNSNNHSRQPRILYLVFAAALFSLILFAIQSSFFSGSLYSDRNSETIRILSQFQSSLQQCVANRGLGLTAHIIDHCTLILKFPKGTNSTWYNAQFKKFEPLEFQYDVCEAIILWEQYRNMTTVLTREYLDTRPDGWLKYAPKRIAQVGVKKCTNRTICEENLNILLPAKPPFHPRQFRTCAVVGNSGDLLKTEFGEEIDSHDAVFRENEAPVNQKYAKHVGLKRDFRLVVRGSAVNMVPILNGSDDEVFIIKSMTHKEINAVIKTVRNPVYLFQGIVLRRGAKGTGMKSVELALSMCDVVDIYGFTVDPGYSLWTRYFTAPRKGHNPLQGRAYYQLLECLGVIRIHSPMRSKRRQDWSDVPSSEMISQAHAAALRLKKSPAAQLGQFGNCKVWGNVDPDKSGPISGSPDMSDVRKYSNYSKWEVMPIESLRKDAQDHYKQMQGVSIYKLDGNRLDDLVCVRHSLKSDV* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1686 474 Gene3D Glycosyl transferase family 29 143 276 IPR038578 -
Lja1g1686 474 Gene3D Glycosyl transferase family 29 277 354 IPR038578 -
Lja1g1686 474 PANTHER SIALYLTRANSFERASE-LIKE PROTEIN 1 11 472 IPR044782 GO:0008373|GO:0009846|GO:0009860
Lja1g1686 474 Pfam Glycosyltransferase family 29 (sialyltransferase) 165 242 IPR001675 GO:0006486|GO:0008373
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1686 Lja-Chr1 18605409 18612887 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1686 68 348 Glycosyltransferase AT1G08660 82.918 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1686 - - gmx:100527382 818.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1686 1 18605409 18612887 Lja1g1686 1 18605409 18612887 ECH