Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1681 ATGGAAGATAGTTTCAGAGTGCGAGCTGAGAAAGCCTTCGGTTCTCTTCCTATACCTTGTTCTTCTTCTTCCTCTCTCTGGTCTCTAACCGATGACGAGATCAAAACCACACCCTCCACCACCACTCGCACCCGCAAACCCGAACCCGAACAACCCAAACCCTACTTCTTCTCCTCCGCCGCCGCCTCTTCCTCTTCCGGCTTCGGCGCTGAGCTGGAAGACGAGCTCCAAGATCTCGACGATGATGTTGATGATGATGAGGACAAGCCGGTTCGGCGTGAACCCACTAAGCCTTCCGATTACGATGATGAACAGTGGGAAATTAGGTCTGGGATTGGCCTCGATTCTACCCTTGATTTCGAGGAAGAGGAAGATCAATATGACAAACAGGCTGTTGGAAATGAAAACTCGGGGGATCGGGTGTATATGAAGGATATAACTGATGATAGAGTTGAGATCAGTCCTTGCGATCGGGTGTATATGAGGGATATGACTGATGATGGAGTTGAGATTAGTTCTTGTGGTGTACTTCCAACTAAGTTCAGAGAATTCGAGAGAGACCTGCGAGCAAATCACATGGCTGCAAGGATTAGGCTGAAGCAGGATGAAGAAGCAACTAAAGAAATCGGTGCTTTGCATGTCTCTGAGAAATCTCCACCAGATATTAGTGGTGGTGGTGGTGGTGGTGATGCTGTTAACCCCAAGTCAATTTTGAAGAGTAGAGAAAATCCCTCTGAGCCTAAGCCCCAGAAACGTGTTCGGTTCGATTCTGAATGTGATGGTAAAGGTGATGATGAAGAGAATGAAGGAACCAGGGATGTTCGCAGAAAGACCACTTCAATGGAAGAAGAGGAGGTTGAGGCTTTAAATCAGCCATCAAAGGCACAAGAATTTGCTTCGGCCGTCCCGGATTATATTCGTAATCCTTCAAGATACACTCATTATACTTTTGATTCTGCAAGTGACATGGATGACAAAGCAAATAAGGAAGCATATATGGGCTTCCTTGCGCAGATGAAGGGAACTGGATCACAGGCAGATGATGCTTTGGATGATCTTCCATCAGTTACCTTTATATCGAAAAAGAAATCTAGTGATGTCACTATGGTTGAGAATGAGATGGTATCAAGGCAAAAGCTTGATGTTGGCAAGGAATCCATGAATAAAAAAGCCTTCCCTGTAAGCATAGCTGCTGCGGGTGACAATGAAAACAGTGATGTTTGTGCAATGGAGGAGGATGAACCAGAAGTCATGGAGGATGCTAAAAAGAGTTCGCAGAGGTTGAACAACCGCAAGTATAGGAAGAAACCCCAGGAGTTGGAGGAGCATGTTGTGTAA 1338 0.4589 MEDSFRVRAEKAFGSLPIPCSSSSSLWSLTDDEIKTTPSTTTRTRKPEPEQPKPYFFSSAAASSSSGFGAELEDELQDLDDDVDDDEDKPVRREPTKPSDYDDEQWEIRSGIGLDSTLDFEEEEDQYDKQAVGNENSGDRVYMKDITDDRVEISPCDRVYMRDMTDDGVEISSCGVLPTKFREFERDLRANHMAARIRLKQDEEATKEIGALHVSEKSPPDISGGGGGGDAVNPKSILKSRENPSEPKPQKRVRFDSECDGKGDDEENEGTRDVRRKTTSMEEEEVEALNQPSKAQEFASAVPDYIRNPSRYTHYTFDSASDMDDKANKEAYMGFLAQMKGTGSQADDALDDLPSVTFISKKKSSDVTMVENEMVSRQKLDVGKESMNKKAFPVSIAAAGDNENSDVCAMEEDEPEVMEDAKKSSQRLNNRKYRKKPQELEEHVV* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1681 445 Coils Coil 69 89 - -
Lja1g1681 445 PANTHER TUMOR SUPPRESSING SUBTRANSFERABLE CANDIDATE 4 TSSC4 157 439 IPR029338 -
Lja1g1681 445 PANTHER BNAC09G30840D PROTEIN 1 149 - -
Lja1g1681 445 MobiDBLite consensus disorder prediction 411 445 - -
Lja1g1681 445 MobiDBLite consensus disorder prediction 1 143 - -
Lja1g1681 445 Pfam Tumour suppressing sub-chromosomal transferable candidate 4 290 343 IPR029338 -
Lja1g1681 445 MobiDBLite consensus disorder prediction 208 297 - -
Lja1g1681 445 PANTHER TUMOR SUPPRESSING SUBTRANSFERABLE CANDIDATE 4 TSSC4 1 149 IPR029338 -
Lja1g1681 445 MobiDBLite consensus disorder prediction 86 109 - -
Lja1g1681 445 MobiDBLite consensus disorder prediction 241 290 - -
Lja1g1681 445 MobiDBLite consensus disorder prediction 416 445 - -
Lja1g1681 445 PANTHER BNAC09G30840D PROTEIN 157 439 - -
Lja1g1681 445 MobiDBLite consensus disorder prediction 17 45 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1681 - - gmx:100819106 476.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1681 1 18538438 18541107 Lja1g1681 1 18538438 18541107 ECH