Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1667 ATGCTGGAATGCATCTCCTTCAACTCACTCACTCCTTCACCATCCAACCTCCCTCCACCACCACCACCTCCTCCACATTCCCAAGGAAACTCAACTGAAGAAGAAGAAGACACACCCATCACGAGTCCCAATGTCTCACACGAGTACGACCTCGCCGTGCAGACCCACTCCTACAACGAGATCCGCTCCATGGTCCTCGCCCCTCCACAACCAGACCTCATCGTCCAAGAAAACGAAACCGACCAAGACTCCCACCACCGCCACGTCCTCACCCAAGTCCTTCAACCCGACCCGGATAGCGTCCGTGAAGCCCTAGCCACCGCTAAACCCACCAGCGCCACCGTCACCCGCCTCGTCTCCTCTTACTTCGACCACAGCCAAAACGCTTCCCACCTCTGCCTCCTCCTCTGCGGCAGCATCCACCGTGCTCGTCAAATCTACGCCCCTCTCTCCGACCTAATCGGCATCCTCGACCCTTCCTCATCCCTCTCTCAGCCTCAATGCGACCGCGCTTACGACCTCTTCCTCCAATTCGACCGCCACGAGAACCCTTTTCTGTTCCCCCACTTTCAGGACCTCCGCCGCAGCTTCTCCAACCTCCGTAGCCACATCCAGCTCGATCGCCGCAAATGCCGCTCCAGAATCCGCCTCCTCCGCCGCGCCACCGCCGGCTGCGCTGTCTGCCTCGTCGCCACCACCGCCGCCGCGGTGGTATCTGCCGCGCTCTTCGCCGTGCACGCTACGGTTGGGTTTGCCGCGGTTGCATTGACCCCCTTTTGTGTTCCTAAGAGTGAGAGGAAGGTGCGTGAGAGGTTGAAGCAGCTTGATGCTGCTGAGAATGGTACTCTTGTGGCAAAAGACATTGACACCATTGATAGCCTCGTGGACCGGCTTCAGACTGCGGTGGAAGGCGATAAGGCTCACGTGAGGTTCGCGTTGGAGAGGGGGAAGGACCGGCACGCGACGCAGGAGGTGGTGAAGCAGCTTCGGAAGACGCAGCTGGTGCTTGAACAGCTGCTTAATGATCTTGAGCAACATATCTACCTCTGCTTTTCCACTGTTAACAAAGCCAGACGTTGCCTGCTCAGAGAGATAAGCCTTCATCAAACTTTGTAG 1116 0.5806 MLECISFNSLTPSPSNLPPPPPPPPHSQGNSTEEEEDTPITSPNVSHEYDLAVQTHSYNEIRSMVLAPPQPDLIVQENETDQDSHHRHVLTQVLQPDPDSVREALATAKPTSATVTRLVSSYFDHSQNASHLCLLLCGSIHRARQIYAPLSDLIGILDPSSSLSQPQCDRAYDLFLQFDRHENPFLFPHFQDLRRSFSNLRSHIQLDRRKCRSRIRLLRRATAGCAVCLVATTAAAVVSAALFAVHATVGFAAVALTPFCVPKSERKVRERLKQLDAAENGTLVAKDIDTIDSLVDRLQTAVEGDKAHVRFALERGKDRHATQEVVKQLRKTQLVLEQLLNDLEQHIYLCFSTVNKARRCLLREISLHQTL* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1667 371 MobiDBLite consensus disorder prediction 13 28 - -
Lja1g1667 371 MobiDBLite consensus disorder prediction 1 46 - -
Lja1g1667 371 Pfam Protein of unknown function (DUF677) 115 365 IPR007749 -
Lja1g1667 371 PANTHER OS04G0405700 PROTEIN 27 369 - -
Lja1g1667 371 PANTHER UPF0496 PROTEIN 3-RELATED 27 369 IPR007749 -
Lja1g1667 371 Coils Coil 326 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1667 Lja-Chr1 18365108 18366718 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1667 - - gmx:100793995 400.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1667 1 18365108 18366718 Lja2g2942 2 50682959 50684529 PCT