Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1662 ATGGCTGTTTCCTACGTTCACATGCTTCAATCTGCCAGAGGTTTCCACAAATGCAACCTCTCATTTTCCAGTCATGAGTATCCTAGACGCAGTTACAAGACCCACCACTTAGTTTTCGCTTCTATGCACACATCAAACCCCAAGGTAGACTCATTTCTGGACAGTTTAAAATGGGATGATAAAGGTTTGGCTGTGGCAATAGCTCAGAATGTTGACACAGGAGCCATCCTAATGCAAGGCTTTGCAAATAGAGAAGCAGTGGTTACAACCATATCTTCTCGCAAGGCCACATTCTATAGCCGGTCACGATCAGCATTGTGGACGAAAGGAGAGACCTCTAATAATTTTATCAATGTTCATGATGTCTTTCTTGATTGTGATCGCGATTCCATAATATACCTTGGAAAACCTGATGGGCCTACCTGCCACACAGGAGCAGAAACATGCTACTATACATCAGTCTTTGACTTGTTAAAAGAACAAGAGGCTGATGGAAATAAATTGGCATTAACTTCTTTGTATGACTTAGAGTCTACAATATCCCAGCGCAAAGCAGAGTTAGCAGAAGTAGAAAATGGAAAGCCTTCTTGGACAAAGCGATTATTGCTTAATGATGAGTTGTTGTGCTCTAAAATCAGAGAAGAGGCAAATGAGTTGTGTCAAACACTAGAGAGTAATGAGGACAAGTCGCGTACTGCTTCAGAGATGGCTGATGTACTGTACCATGCCATGGTTTTGATGGCACGGAAAGATGTCAAAATGGAAGATGTTTTGCAGGTTCTTCGGCAAAGATTTTCCCAATCTGGTATTGAGGAAAAGAGAAGTCGTGCGTCCCAGAAATCAGTGGACGGGTGA 855 0.4246 MAVSYVHMLQSARGFHKCNLSFSSHEYPRRSYKTHHLVFASMHTSNPKVDSFLDSLKWDDKGLAVAIAQNVDTGAILMQGFANREAVVTTISSRKATFYSRSRSALWTKGETSNNFINVHDVFLDCDRDSIIYLGKPDGPTCHTGAETCYYTSVFDLLKEQEADGNKLALTSLYDLESTISQRKAELAEVENGKPSWTKRLLLNDELLCSKIREEANELCQTLESNEDKSRTASEMADVLYHAMVLMARKDVKMEDVLQVLRQRFSQSGIEEKRSRASQKSVDG* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1662 284 PANTHER HISTIDINE BIOSYNTHESIS BIFUNCTIONAL PROTEIN 1 277 - -
Lja1g1662 284 Gene3D - 170 266 - -
Lja1g1662 284 PANTHER BNAC05G24080D PROTEIN 1 277 - -
Lja1g1662 284 Pfam Phosphoribosyl-ATP pyrophosphohydrolase 175 264 IPR021130 -
Lja1g1662 284 TIGRFAM histidine_hisI: phosphoribosyl-ATP diphosphatase 173 261 IPR008179 GO:0000105|GO:0004636
Lja1g1662 284 Hamap Histidine biosynthesis bifunctional protein HisIE [hisI]. 54 266 IPR023019 GO:0000105|GO:0004635|GO:0004636
Lja1g1662 284 SUPERFAMILY HisI-like 53 155 IPR038019 -
Lja1g1662 284 Gene3D - 42 142 IPR038019 -
Lja1g1662 284 Coils Coil 209 229 - -
Lja1g1662 284 Pfam Phosphoribosyl-AMP cyclohydrolase 78 151 IPR002496 GO:0000105|GO:0004635
Lja1g1662 284 CDD NTP-PPase_HisIE_like 173 261 IPR008179 GO:0000105|GO:0004636
Lja1g1662 284 SUPERFAMILY all-alpha NTP pyrophosphatases 173 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1662 Lja-Chr1 18251645 18256007 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1662 K11755 - gmx:100807276 467.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1662 1 18251645 18256007 Lja1g1662 1 18251645 18256007 ECH