Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1646 ATGGGCAACATGAAGAACAGAACATCAAGGTTGCTGAAGCAATTCATAGCTGGTTTGAGCTCAATGGCCAAGTCAAAAACTCTGGCTTTGAAGTCCAAAACAAATGCCATCAAGGCTCGTTTGATCATATTCTCACTCATGAAGAACAAGAAATTTCTCATGAGCTCATTTACTGAGAAGTTCAATTCTCTCTTTGGTGGGAACCATTCTCAGGCCAATGAAGATTGCTTATTGGAAGATGGCAGTAGCAGCATCAGCAGGGCCATAGTGTTGTACAACAACAATGCTCACACCTATGAGGCCTTGCCAAATCCCTGTGAAAGCCATGAGTGTGGTTGTGAAAATGAAGGTCACTTTGGGTATGGAGATGCAGCAGAAGAAGATGATGATGACAAGTACCCGGATCTGACACACTGTCTTTTTGACTCTGAGGGTTTGGATCTTGGAGGCTCTGTGATTGATATAGTGAAACATTCTAAGGAAGAAGCAGGGCAAGAGTTTAAGCTGGAGGATGAGATTGACCAAGTGGCTGATCTTTTCATCAAGAAGTTCCGCAGGCAAATGATCTTGCAGAAGCAAGATTCATTGAAGAGGAAGCGAGAACAGAACGAAGCCTGA 618 0.4353 MGNMKNRTSRLLKQFIAGLSSMAKSKTLALKSKTNAIKARLIIFSLMKNKKFLMSSFTEKFNSLFGGNHSQANEDCLLEDGSSSISRAIVLYNNNAHTYEALPNPCESHECGCENEGHFGYGDAAEEDDDDKYPDLTHCLFDSEGLDLGGSVIDIVKHSKEEAGQEFKLEDEIDQVADLFIKKFRRQMILQKQDSLKRKREQNEA* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1646 205 Pfam Cotton fibre expressed protein 170 199 IPR008480 -
Lja1g1646 205 PANTHER COTTON FIBER PROTEIN 4 203 - -
Lja1g1646 205 PANTHER EMB|CAB67623.1-RELATED 4 203 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1646 - - gmx:100807332 266.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1646 1 18077786 18079009 Lja1g1646 1 18077786 18079009 ECH