Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1641 ATGTCTCCAATGTTTGGTGCTACTGTTACCATTGGCATTGGCATTGATCCTCTGTTACAATTGCAAGCTGTTTCCGATCCCCTTCTTGCGCTCAAGAACAACCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTGTTTCTCTCTTCTGCAACCGAACCACCACCACCACCATCATCGCCAGTTGTAGCAGCAGTAGCTGGAGGAAGAAGAAGAATTCAACAATGGCTTCTTCCAATATGAGAACCAACAATTACCTGCGCCATGTGGAATCAATGAAGCTTCTTCCATCTGGTGCTGGCCACATTTCTCATCTGAACGCTGTGATTCTCGGTGAATCACTCGCCTCTGAGGAAGACGATTTCGTTCTTCCAAGCGAGGAGTTTGCAAGCCAAGCGAATGTTCAGTCCCCAGAACAGTATGCGAAGATGTATAAGAGATCGATTGAGGACCCTGCTGGATTCTGGTCTGATATTGCATCACAATTCTATTGGAAAAAGAGATGGGGTGATCAAGTTTTTGAGGAAAATTTGGATGTCAGGAAAGGGAATGTTAAGATTGAGTGGTTCAAGGGTGGGATCACCAACATCTGTTATAATTGCTTGGATAGACATATTGAAGCTGGACTAGGTGACAAAATTGCCATTTATTGGGAAGGCAATGAACTTGGTGTAGATGGTAGTTTAACATACTCTCAGCTTCTAGATCAAGTTTGCCAGGTTGCTAACTACCTGAAAGATGTTGGTGTGAAAAAGGGTGATGCTGTTATTGTTTATTTGCCTATGCTTATGGAGCTTCCAATCACAATGCTTGCATGTGCCCGCATTGGTGCTGTTCATTCGGTTGTATTTGCCGGTTTTTCTGCAGACTCTCTTGCGCAGAGAATCATTGACTGTAAACCAAAAGTTGTAATCACTTGCAATGCTGTTAAAAGAGGCCCTAAGGCTATCTATCTGAAAGACATAGTGGATGCTGCCATCCATCAATCTGCCCAAAGTGGGGTCTCTATAGATGTATGCCTAACTTATGAAAATCCGTACGCAATGAAGAGGGAAGATACCAAATGGAAGGAAGGGAGGGATATATGGTGGCAGGATGTCATTCCTCGATATCCAAATACTTGTCCAGTGGAGTGGGTTGATGCAGAGGATCCACTTTTTCTACTCTATACAAGTGGGAGTACAGGAAAACCTAAGGGTGTCCTCCATACAACTGGTGGTTACATGGTGTACACTGCAACAACATTTAAGTATGCATTTGACTACAAGCCGTCCGACATTTTCTGGTGTACAGCTGATTGTGGTTGGATTACTGGGCACAGTTATGTAACTTACGGACCCATGCTCAATGGTGCAACTAATATTGTGTTTGAAGGGGCACCCAATTATCCGGATGCTGGTCGTTCTTGGGACATTGTTGACAAATATAAAGTTTCAATATTTTACACTGCCCCCACATTGGTCCGGTCCCTCATGCGCGAAGGTGATGGGCTTGTTACTCGCTACTCAAGGAAATCTTTACGAGTCCTTGGAAGTGTTGGTGAGCCCATAAATCCAAGTGCATGGAGGTGGTTTTACAACGTAGTAGGAGATTCAAGGTGCCCTATCTCTGACACTTGGTGGCAAACAGAAACCGGTGGTTTCATGATAACTCCACTACCAGGTGCTTGGCCCCAGAAGCCTGGTTCTGCAACTTTCCCTTTCTTTGGAGTTCAGCCTGTCATAGTGGATGAGAAAGGTGATGAAATAGAAGGCGAGTGCAGTGGTTATTTGTGTGTTAAAGGATCATGGCCCGGGGCTTTCAGAACTCTCTATGGTGATCATGAAAGATACGAAACAACATATTTCAAGCCATTTGCTGGCTACTATTTCAGTGGTGATGGCTGCAGCAGGGATAAAGACGGATACCATTGGCTCACTGGAAGAGTTGACGATGTCATCAATGTCAGTGGGCATCGTATTGGCACAGCTGAAGTGGAATCAGCTTTAGTCTCACATCCTCAATGCGCAGAGGCCGCTGTGGTTGGTGTGGAGCATGAGGTCAAAGGACAGGGTATCTATGCATTTGTTACTCTTGTGGAGGGTGTTCCTTACAGTGAGGAACTGCGGAAGAACCTCATACTCACAGTTCGAAAGCAGATAGGAGCATTTGCAGCACCAGACAAAATCCACTGGGCACCTGCACTCCCGAAAACAAGGAGCGGAAAGATAATGAGAAGAATTCTGAGAAAAATTGCTTCTAGGCAGCTTGATGAACTTGGAGATACAAGTACCCTTGCAGATCCAAACGTGGTCAATCAACTTATAGAGCTTTCTGATGCATGA 2331 0.4483 MSPMFGATVTIGIGIDPLLQLQAVSDPLLALKNNPSSSSSSSSSSSSSVSLFCNRTTTTTIIASCSSSSWRKKKNSTMASSNMRTNNYLRHVESMKLLPSGAGHISHLNAVILGESLASEEDDFVLPSEEFASQANVQSPEQYAKMYKRSIEDPAGFWSDIASQFYWKKRWGDQVFEENLDVRKGNVKIEWFKGGITNICYNCLDRHIEAGLGDKIAIYWEGNELGVDGSLTYSQLLDQVCQVANYLKDVGVKKGDAVIVYLPMLMELPITMLACARIGAVHSVVFAGFSADSLAQRIIDCKPKVVITCNAVKRGPKAIYLKDIVDAAIHQSAQSGVSIDVCLTYENPYAMKREDTKWKEGRDIWWQDVIPRYPNTCPVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAFDYKPSDIFWCTADCGWITGHSYVTYGPMLNGATNIVFEGAPNYPDAGRSWDIVDKYKVSIFYTAPTLVRSLMREGDGLVTRYSRKSLRVLGSVGEPINPSAWRWFYNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGDEIEGECSGYLCVKGSWPGAFRTLYGDHERYETTYFKPFAGYYFSGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELRKNLILTVRKQIGAFAAPDKIHWAPALPKTRSGKIMRRILRKIASRQLDELGDTSTLADPNVVNQLIELSDA* 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1641 776 PANTHER ACETYL-COENZYME A SYNTHETASE 96 776 - -
Lja1g1641 776 Gene3D - 123 646 IPR042099 -
Lja1g1641 776 ProSitePatterns Putative AMP-binding domain signature. 390 401 IPR020845 -
Lja1g1641 776 TIGRFAM Ac_CoA_lig_AcsA: acetate--CoA ligase 138 772 IPR011904 GO:0003987|GO:0016208|GO:0019427
Lja1g1641 776 Pfam Acetyl-coenzyme A synthetase N-terminus 143 203 IPR032387 -
Lja1g1641 776 Hamap Acetyl-coenzyme A synthetase [acs]. 120 774 IPR011904 GO:0003987|GO:0016208|GO:0019427
Lja1g1641 776 CDD ACS 141 763 - -
Lja1g1641 776 SUPERFAMILY Acetyl-CoA synthetase-like 129 771 - -
Lja1g1641 776 Gene3D - 647 776 IPR045851 -
Lja1g1641 776 PANTHER ACETYL-COENZYME A SYNTHETASE 96 776 - -
Lja1g1641 776 Pfam AMP-binding enzyme 213 651 IPR000873 -
Lja1g1641 776 Pfam AMP-binding enzyme C-terminal domain 660 738 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1641 Lja-Chr1 17997377 18006197 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1641 85 775 Acyl Lipid Metabolism Gene Families AT5G36880 84.805 0.0 1264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1641 K01895 - gmx:100808939 1350.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1641 1 17997377 18006197 Lja1g1641 1 17997377 18006197 ECH