Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1638 ATGGAATTGGCAATGAAGGTAGCTGAGGCCGTCCATGTGTTGAACCACGATACCCAATCGTGCAACCGCGTCGCAGCCAATCAGTGGCTCGTTCAGTTCCAACAAACTCACGCCGCCTGGGACGTCGCCACCAACATCCTCACCGCCGATCGCCGCCACACCACCAATTTCGAGGTCGAGTTCTTCGCCGCACAGATTCTCAAACGCAAGATACAAAATGAAGGTTATCAACTGCAATTGGGAGCTAAGGATGCTTTGTTAAATGCTCTTCTTCTTGCAGTCCAAAGATTCAGTAGTGGCCCTCCCCAGCTCTTAACGCAGATTTGTCTTGCACTATCTGCTCTCATACTTCAAGTTGTTGCACATGGAAACCCGATTGAGCAGCTTTTTTACAGTCTCCAGAATCTGCAGAGCCAGGATGGTGGCAATATGGCTGTCCTCGAGATGCTCACTGTCCTCCCAGAGGAAGTTGTTGACAGCCAACGTATTGACTCTAAAATGAGTTCATTGCACAAAAGCCACTATACCCAGGAGCTTCTCTCCCATACGTCTATGGTTCTTGAGTTCTTGCGGCAGCAATCTGAAATAAATTCTGATGGTTCTGTGCAACATCATGAAAGGAACAAGAAAATTTTGCGCTGCTTTTTGAGCTGGATTAGGGCAGGTTGCTTCTCCGAGATTTCTTCAGGAACATTACCAGCTCACCCACTTCTAAATTTTGTATTCAACTCCTTACAGGTTCCTTTGACATTTGATCTGGCCATTGAAGTTCTTGTTGAACTTGGGACTAAACATGAGGGATTGCCCCAAATTTTGTTATGCAGAGTACATTACCTGAAGGAAGTACTTCTTTTTCCAGCTCTGACTAGGGGAGACATGAAAGTAATTGGTGGCGTAGCGTGCCTCTTGTCAGAAATTGGGCAGGCTGCTCCATCTCTAATTGTCGAAGCAAATGCAGAAGCCCTTGCACTGGCAGATGCGCTCCTGAGCTGTGTAGCATTTCCATGTGAAGATTGGGAGATTGCAGACTCAACCCTGCAGTTTTGGTCTACTCTTGCGAGCTATATACTTGGAATTGATGAAGATGACAGAGAAAGTAGAAAACACGCGGAAGACATTTTTTCACCTGTGTTCTCAGCATTACTTGATTCACTGTTATTGCGTTCTCAGGTGGATGACTCTACATATAATGATGAGGGAAGAGTGATTGATTTACCTGATGGGCTTGTCCATTTCAGAATGAACCTAGTAGAACTTTTGGTGGATATATGTCATATGTTAGGATCTTCTATATTTATGCAAAAGCTCTTTATTGGTAGGTGGGCATCTCAGAATCCATCAATCCCTTGGAAGGAAGTGGAAAGCAAGCTTTTTGCGCTTAATGCTGCTGCCGATGTGATCATACAGGATGGCCAAAGTTACGGTTTCTCTGTAATCATGCAGTTGGTGACCATGTTGTCCACTAAGCCTTCTGATGGCTTAAAGGGTTTCATTTGCATTGTATACAGATCTCTAGCGGATGCTATTGGTTCTTATTCCAAGTGGGTATCTGCTTTTAAGGAAAATTTTAGACCCTTGCTATTATTTCTTGCTATTGGGATTTCAGAGCCTCTTTCTTCAAATGCTTGCGCATCTGCCCTGCGTAAAATCTGTGAAGATGCTTCAGTAGTAATTTATGAACCTTCAAATTTGGAGATTTTAATGTGGATTGGAGAGGGCCTCGAGAAGTGGCATTTATCATTGGAAGATGAGGAAGAAGTTATGCAGGCAATAAGTTTGGTCCTTGGTTCTGTTCCCAATCAAGAACTAAAGAGCAACTTATTGGCTAGATTGCTTTCATCCAGTTATGAAGCTATTGGGAAGCTTGTTGATCCAGATAAGAGCCTTTCTCTTAAACAGAACCCTGCTTCTTACACACAAATTTTGAGTGCAGCCTCTAGAGGATTGCACAGAATGGGAACTATATTCAGTCATCTTCCCATATCGGTGGCGACTGAACCTGAGGCAGATGAATTAATACTTTCACTGCTTAGAGTTTTCTGGCCCATCTTGGAGAAAATTTTTAGTTCTGAGCATATGGAGAGTGGCAATTTATCCATAGCAGCTTGCCGGGCCCTTTCACTAGCTATTCAATCTTCAGGTCAGCATTTTGTGACACTACTGCCCAAAGTGTTAGATTGGCTTTCCACAAATTTTGTTTCATTCCAAAGTCATGAGTGTTATATAAGAACTGCTTCCATTGTCATTGAAGAATTTGGTCACCGAGAGGAGTATGGACCTTTATTTGTCACCATGTTTGAAAGATTTACCCATGCAACTTCTGTAATGGCTCTAACTTCCTCTTACATATGTGACCAAGAACCTGACTTGGTGGAGGCCTACACCAATTTCACATCCACGTTTATTCGTTCCTGTAACAAGGATACTCTTTCAGCATGTGGTTCTCTTCTTGAAGTTTCTATCCAGAAAGCAGCTATATGTTGCACAGCCATGCACCGCGGTGCTGCGCTAGCTGCGATGTCATATTTATCTTGTTTCTTAGATGTGGGCCTTGTCTCTTTGTTAGAGTGTATGAATTGTATTATTGAGGAGTCATTCAACAACACGGCCATTCATGTCATATCTCACAGCGGAGAGGGGCTTGTATCTAATGTGGTGTATGCTTTACTCGGTGTGTCTGCTATGTCGCGGGTTCATAAGTGTGCAACAATTTTGCAACAACTGGCGGCAATTTGTACTTTATCCGAAAGAACAACATGGAAGGCTATACTTTGCTGGCAGACTTTTCACGGGTGGCTGCAATCAGCGGTTCAGGCTCTTCCTGTGGAATACCTAAACCATGGAGAAGCAGAAACCATAGTTCCACTCTGGTCAAAGGCCCTTACTGATGCAGCTACTGATTATATTGAGAGCAAGAACTCTGATGGAGTGAAGAGTAATTTTGGACACATGCAAGGAAAGGGTGGGAGAGTTTTGAAGCGTCTGGTTCGGGAATTCGCTGATGCTCATCGAAATATTCCAAATCTGACTTGA 3033 0.4359 MELAMKVAEAVHVLNHDTQSCNRVAANQWLVQFQQTHAAWDVATNILTADRRHTTNFEVEFFAAQILKRKIQNEGYQLQLGAKDALLNALLLAVQRFSSGPPQLLTQICLALSALILQVVAHGNPIEQLFYSLQNLQSQDGGNMAVLEMLTVLPEEVVDSQRIDSKMSSLHKSHYTQELLSHTSMVLEFLRQQSEINSDGSVQHHERNKKILRCFLSWIRAGCFSEISSGTLPAHPLLNFVFNSLQVPLTFDLAIEVLVELGTKHEGLPQILLCRVHYLKEVLLFPALTRGDMKVIGGVACLLSEIGQAAPSLIVEANAEALALADALLSCVAFPCEDWEIADSTLQFWSTLASYILGIDEDDRESRKHAEDIFSPVFSALLDSLLLRSQVDDSTYNDEGRVIDLPDGLVHFRMNLVELLVDICHMLGSSIFMQKLFIGRWASQNPSIPWKEVESKLFALNAAADVIIQDGQSYGFSVIMQLVTMLSTKPSDGLKGFICIVYRSLADAIGSYSKWVSAFKENFRPLLLFLAIGISEPLSSNACASALRKICEDASVVIYEPSNLEILMWIGEGLEKWHLSLEDEEEVMQAISLVLGSVPNQELKSNLLARLLSSSYEAIGKLVDPDKSLSLKQNPASYTQILSAASRGLHRMGTIFSHLPISVATEPEADELILSLLRVFWPILEKIFSSEHMESGNLSIAACRALSLAIQSSGQHFVTLLPKVLDWLSTNFVSFQSHECYIRTASIVIEEFGHREEYGPLFVTMFERFTHATSVMALTSSYICDQEPDLVEAYTNFTSTFIRSCNKDTLSACGSLLEVSIQKAAICCTAMHRGAALAAMSYLSCFLDVGLVSLLECMNCIIEESFNNTAIHVISHSGEGLVSNVVYALLGVSAMSRVHKCATILQQLAAICTLSERTTWKAILCWQTFHGWLQSAVQALPVEYLNHGEAETIVPLWSKALTDAATDYIESKNSDGVKSNFGHMQGKGGRVLKRLVREFADAHRNIPNLT* 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1638 1010 Gene3D - 3 979 IPR011989 -
Lja1g1638 1010 PANTHER TRANSPORTIN 3 AND IMPORTIN 13 1 1009 - -
Lja1g1638 1010 SUPERFAMILY ARM repeat 1 811 IPR016024 -
Lja1g1638 1010 Pfam Exportin 1-like protein 101 258 IPR013598 -
Lja1g1638 1010 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 1009 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1638 K15436 - gmx:100808691 1764.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1638 1 17948509 17971895 Lja1g1638 1 17948509 17971895 ECH