Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1634 ATGCCAAATAGCAGAAATCCTCTTGTTGTTGGGCGGGTAATAGGTGATGTATTAGACCCCTTTGAAAGCTCAATTCCTCTAAGAGTCACATATGGTAGTAGAGATGTCACCAATGGCTGTGAGTTTAAACCTTCCCAAGTTCCCAATCAACCCAGAGTGTCGGTCGGCGGAGATGACCTCAGAACCCTCTACACTTTGGTCTTAGTTGATCCTGATGCACCTAGCCCAAGTAACCCCAGCTTCAGGGAGTACCTTCACTGGTTGGTGACTGATATTCCAGCGACTACAGGGGCAAGTTTCGGTAATGAGATTGTAGCTTATCAGAGCCCACGACCCACCATGGGGATTCATCGTTTCGTGTTCGTGTTGTTCCGCCAACAGTGTAGACAAAGAGTATATGCTCCGGGATGGCGACAAAATTTTAATACGAGAGAATTTGCTGAACTTTACAATCTTGGGTTGCCAGTTGCTGCTGTCTTCTTTAACTGTCAGAGGGAGACTGGTTCTGGTGGAAGAACATTTTAA 525 0.4629 MPNSRNPLVVGRVIGDVLDPFESSIPLRVTYGSRDVTNGCEFKPSQVPNQPRVSVGGDDLRTLYTLVLVDPDAPSPSNPSFREYLHWLVTDIPATTGASFGNEIVAYQSPRPTMGIHRFVFVLFRQQCRQRVYAPGWRQNFNTREFAELYNLGLPVAAVFFNCQRETGSGGRTF* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1634 174 PANTHER PROTEIN FLOWERING LOCUS T-RELATED 5 173 - -
Lja1g1634 174 Gene3D - 2 169 IPR036610 -
Lja1g1634 174 SUPERFAMILY PEBP-like 12 166 IPR036610 -
Lja1g1634 174 CDD PEBP_euk 26 163 IPR035810 -
Lja1g1634 174 Pfam Phosphatidylethanolamine-binding protein 51 158 IPR008914 -
Lja1g1634 174 PANTHER PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN 5 173 IPR035810 -
Lja1g1634 174 ProSitePatterns Phosphatidylethanolamine-binding protein family signature. 64 86 IPR001858 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1634 Lja-Chr1 17821276 17823268 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1634 K16223 - gmx:100803909 325.865