Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1628 ATGCTGAAGCGTCCCGGTCGCCAGGAGTCTCTCTCCGATAAGATCTACCGGTTTCGAGGGACTCTGCTTGTGATCTCGATCCCGCTCGTTCTCATCACCTTCGTCCTCTACATGATGCCTTCGAGCTCCACCACGGAGTCCGTTGGAGACTACGCCCTTGTCAACCGGAAAATTTCTCCCGATAAAAAATCCGGTGGCTCCTACGCCGTTATCTTCGATGCTGGCAGCTCTGGCAGCCGCGTCCATGTCTTCCATTTCGATCAGAACCTAGATCTCCTTCACATTGGCAAAGATCTCGAGCTTTTCGTGCAGCTTAAACCGGGTTTGAGTGCGTACGCTCAGAATCCACAGCAGGCAGCTGAATCTCTGGTTTCACTTTTGGATAAAGCGGAGAGTGTTGTTCCTCGCGAATTGCGATCCAAGACACAAGTTAGAGTTGGGGCAACTGCGGGGTTGAGGGCTTTGGAAGGGGATGCATCTGATAGGATTTTGCAAGCGGTAAGAGATTTGCTCAAGAAAAGAAGCTCATTGAAATCCGAGGCTGATGCGGTTACTGTGCTGGATGGGGTACAAGAAGGTGCTTTCCAATGGGTTACAATTAACTATCTATTGGGAAACTTGGGAAAAGATTATTCAAAGACAGTTGGGGTAGTTGATCTTGGAGGTGGATCTGTTCAAATGGCATATGCCATCTCAGAGACTGAGGCTGCCCAGGCTCCAAAAGTAACAGATGGACAGGACCCATATGTCAAGGAGATGTTCCTGAGGGGAAGGAAATATTACCTCTATGTTCACAGTTACTTGCGCTATGGTTTACTAGCTGCTCGTGCTGAGATGTTAAAGGTTTCTGGTGATGCTGTAAACCCTTGTATCTTATCTGGCTATGATGGAACATACAAATATGGAGGAAAGCCATTTAAGGCTTCGTCCAACCCTTCTGGGTCAAGCTTAAACGAATGCAAAAGCATAGCCCTTAAGGCTCTCAAAGTAAATGAGTCAACATGCACACATATGAAGTGCACTTTTGGTGGTATATGGAATGGTGGAGGGGGGGATGGGCAGAAAAATCTTTTTGTTGCCTCATTTTTCTTTGACCGGGCTGCCGAGGCCGGTTTTGCTGATCCAAACGCACCAGTTGCTATAGTTCGTCCTGCAGATTTTGAGGATGCAGCTAAGCAAGCTTGTCAAACAAAACTTGGGGATGCCAAATCCACATATCCACATATTGAAGATGGGAACCTTCCATATATTTGCATGGATCTTGTATACCAGTATACACTGCTTGTTGATGGGTTTGGTATATATCCATGGCAAGAGGTTACATTGGTGAAGAAAGTTAAGTACGATGATGCCCTTGTTGAGGCAGCATGGCCTCTAGGAAGCGCCATAGAAGCTGTGTCATCTTCGTAA 1410 0.4695 MLKRPGRQESLSDKIYRFRGTLLVISIPLVLITFVLYMMPSSSTTESVGDYALVNRKISPDKKSGGSYAVIFDAGSSGSRVHVFHFDQNLDLLHIGKDLELFVQLKPGLSAYAQNPQQAAESLVSLLDKAESVVPRELRSKTQVRVGATAGLRALEGDASDRILQAVRDLLKKRSSLKSEADAVTVLDGVQEGAFQWVTINYLLGNLGKDYSKTVGVVDLGGGSVQMAYAISETEAAQAPKVTDGQDPYVKEMFLRGRKYYLYVHSYLRYGLLAARAEMLKVSGDAVNPCILSGYDGTYKYGGKPFKASSNPSGSSLNECKSIALKALKVNESTCTHMKCTFGGIWNGGGGDGQKNLFVASFFFDRAAEAGFADPNAPVAIVRPADFEDAAKQACQTKLGDAKSTYPHIEDGNLPYICMDLVYQYTLLVDGFGIYPWQEVTLVKKVKYDDALVEAAWPLGSAIEAVSSS* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1628 469 Gene3D Exopolyphosphatase. Domain 2 188 447 - -
Lja1g1628 469 PANTHER APYRASE-LIKE PROTEIN 1 468 - -
Lja1g1628 469 Pfam GDA1/CD39 (nucleoside phosphatase) family 66 467 IPR000407 GO:0016787
Lja1g1628 469 Gene3D - 68 463 - -
Lja1g1628 469 CDD NBD_sugar-kinase_HSP70_actin 70 229 - -
Lja1g1628 469 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 1 468 IPR000407 GO:0016787
Lja1g1628 469 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 187 202 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1628 Lja-Chr1 17727273 17733749 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1628 6 468 Calmodulin-binding Proteins AT3G04080 70.410 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1628 K14641 - gmx:100786073 837.025