Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1617 ATGGCTGAGGTTTTTACCAATACCAGTTTGGTTTCTTCTTGGCTTGGCCACACACAACAACACCACCATAATCAGAAGTTGATGGTGTCCAAGGTTGCCAAGAGTTGTAGCTTCCCTTCTTTGAAGCTGAAGTCTCAGGCTCTCAGATCTTCACCCTTTTCATCAGAGTTTCATGGTAAAAAACCTGTATTTCGTGTTAATAGAGCAATATCTAGCAGACCCAGATCGCAGTTTCCACCTTCAAACGGTGTTCAGATGACCTTAAGATTAGGGAAAGTTCAGAAATGGTGGGAGAAGGGTCTTCAACCAAACATGAGAGAGGTGACTTCGGCTGAAGACCTTGTTGACTCTCTTTTGAACGCAGGGGATAAGCTTGTGATTGTTGATTTCTTCTCTCCTGGTTGTGGTGGCTGCAAAGCTCTTCATCCTAAGATTTGTCAACTGGCTGAGATGAATCCGGATGTTCAGTTCCTTCATGTGAACTATGAGGAACATAAATCTATGTGTTATAGCCTTAACGTTCATGTCCTTCCCTTCTTCCGCTTTTATAGAGGCGCTCATGGTCGCTTATGTAGCTTTAGCTGCACAAATGCCACGATCAAGAAGTTTAGAGATGCATTGGCCAAACACACTCCCGATAGATGCAGTTTGGGACCAACCAAAGGGTTAGAGGAGAAAGAGCTCCTAGCTCTTTCTGCCAACAGAGATCTTTCTTTCACATACTCGCCTTTGCAGCCTGCACATTCCCCTGCAAATGAAGAGTTTGCAACGGAAGCTGCTCCTGAGTCCCTCCCTTTACCTTCATTGACCTCCAAGTCGGAGTCCTCGGAACAGAGAACCCTGACCACTGCTGGGAGATGA 861 0.4564 MAEVFTNTSLVSSWLGHTQQHHHNQKLMVSKVAKSCSFPSLKLKSQALRSSPFSSEFHGKKPVFRVNRAISSRPRSQFPPSNGVQMTLRLGKVQKWWEKGLQPNMREVTSAEDLVDSLLNAGDKLVIVDFFSPGCGGCKALHPKICQLAEMNPDVQFLHVNYEEHKSMCYSLNVHVLPFFRFYRGAHGRLCSFSCTNATIKKFRDALAKHTPDRCSLGPTKGLEEKELLALSANRDLSFTYSPLQPAHSPANEEFATEAAPESLPLPSLTSKSESSEQRTLTTAGR* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1617 286 Gene3D Glutaredoxin 98 215 - -
Lja1g1617 286 ProSiteProfiles Thioredoxin domain profile. 72 212 IPR013766 -
Lja1g1617 286 Pfam Thioredoxin 116 186 IPR013766 -
Lja1g1617 286 PANTHER THIOREDOXIN, MITOCHONDRIAL 1 286 - -
Lja1g1617 286 CDD TRX_family 121 185 - -
Lja1g1617 286 MobiDBLite consensus disorder prediction 242 286 - -
Lja1g1617 286 PANTHER THIOREDOXIN-LIKE 1-3, CHLOROPLASTIC 1 286 - -
Lja1g1617 286 MobiDBLite consensus disorder prediction 264 286 - -
Lja1g1617 286 SUPERFAMILY Thioredoxin-like 94 210 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1617 Lja-Chr1 17544858 17547402 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1617 - - lja:Lj0g3v0112529.1 413.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1617 1 17544858 17547402 Lja1g1617 1 17544858 17547402 ECH