Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1609 ATGATCAACCACTTCAAATATCTCACTGTTTTCAGAAGAAACTTTCAATCTCTGATCACAAATTCCAAAGAAGAATCCATGGCCCAGTTCACTACACACGGTCGCTTGAAGCTGCTCTTCAATGGGGAAGTTGGGTCATCCATTTTGGAGCACAACAAGGACCCTTTTCACTACAAGTGCAGCAGATCAGCTCTGACACGCAAGAGAAGGCCAACAAGGTACATGGGTTCTTCAGCTGGAGGAATTCTTCGATATGCAACTTCATCTATGAGAAACAAAGCCAACCGTTGCAATGCGGAGGCGCGCTTCACTGCTGGCAATGAGGGTGTGCATGATGAATATGAATATGATTCTGATGGTGTTGAGGATTTTGATTATGAAGATGATGTGTTTGGGTTTGATGGAGATGGCTTGTCTTGTTTCCGGGGTCTGGTATTGGATTTAGCTTACAGGCCAGTCAATGTTGTATGCTGGAAACGTGCCATATGTTTGGAGTTTATGGAGAAGGCTGATGTACTTGAGTATTATGAAAAGACTGTGAACTCCCCCAGTGGATCTTTTTATATACCAGCTGTCTTAAGGGTTCCTCATTTACTTCAGGTTGTTAAAAGAAGAATAGTGAAGAACAATCTTAGTCGCAAAAATATACTATTCAGGGACCATTTCACCTGTCAGTATTGCTCTTCGCGTGAGAATTTGACCATTGATCACGTGGTGCCTGCTGCACTAGGTGGAGAATGGACATGGGAAAATCTAGTGACTGCTTGTGCCAAATGCAACTCAAAGAAAGGTAAAAAATCTTTAGAGGAGGCAAAAATGAAGTTGAACAAAGTTCCAAAGGCCCCAAAGGAGTATGACATTCTTGCTATACCTCTAACTGCCGCAGCACTTAGAATGCTGTCAAAAAGAAAGGGGACACCTGAAGAATGGCGTCAGTATCTAAGGTCCTCTTAA 954 0.4277 MINHFKYLTVFRRNFQSLITNSKEESMAQFTTHGRLKLLFNGEVGSSILEHNKDPFHYKCSRSALTRKRRPTRYMGSSAGGILRYATSSMRNKANRCNAEARFTAGNEGVHDEYEYDSDGVEDFDYEDDVFGFDGDGLSCFRGLVLDLAYRPVNVVCWKRAICLEFMEKADVLEYYEKTVNSPSGSFYIPAVLRVPHLLQVVKRRIVKNNLSRKNILFRDHFTCQYCSSRENLTIDHVVPAALGGEWTWENLVTACAKCNSKKGKKSLEEAKMKLNKVPKAPKEYDILAIPLTAAALRMLSKRKGTPEEWRQYLRSS* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1609 317 CDD HNHc 213 264 IPR003615 -
Lja1g1609 317 Pfam HNH endonuclease 224 275 IPR029471 -
Lja1g1609 317 SMART HNH_5 211 261 IPR003615 -
Lja1g1609 317 PANTHER SLL1193 PROTEIN 82 316 - -
Lja1g1609 317 Gene3D - 200 289 - -
Lja1g1609 317 PANTHER SLL1193 PROTEIN 82 316 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1609 - - lja:Lj1g3v3964650.1 651.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g1609 1 17413381 17420888 Lja1g1609 1 17413381 17420888 ECH