Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g1600 ATGGCTTCTCCTAATAACCCTCTTATTACTCCTTACAAGATGGGCAACTTCAACCTCTCCCACAGAATCGTTTTGGCGCCGCTTGCCAGAATGAGATCCTACAACAATGTTCCACAGCCCCATGCTACTCTCTATTACTCTCAGAGATCTTCCCAAGGAGGCCTTCTCATAGCTGAAGCCACTGGCGTCTCCGACACTGCTCAAGGCTATCCAAACACCCCCGGCATTTGGACAAAGGAACAAGTACTAGCCTGGAAACCCATTGTGGACGCTGTTCATGCCAAAGGCGCTCTATTCTTCTGCCAGATTGTGCATGTTGGAAGGGTTTCATCTTCATCTTTTCAGCCAAACGGGCAAGCACCGATATCTTCCACAGACAAGCCACTCGCGCCACAAGATGGCATGGAATTCACACCACCAAGGCGCCTAACGAAGGAAGAAATTCCTCAGATTGTCCATGACTTCAGACTCGCTGCAAGGAATGCTATTCAAGCTGGTTTTGATGGGGTTGAGATCCATGGGGCTCATGGCTACCTGCTTGACCAATTTATGAAAGACAAAGTGAATGACCGAACAGATGAATATGGTGGTTCGCTTGAGAACCGTTGTCGATTTCCATTGGAAATTGTTGAAGCTGTGGCGAGTGAGATAGGAGCAGAAAGAGTTGGAATTAGGTTATCGCCTTTTGCAGACTATGCAGAATCTGGAGACTCTAGTCCTGACGAGTTGGGGCTTTATATGGCTAATGCCCTCAATAAATACAATATTCTGTACTGTCACATGGTAGAGCCGAGAATGAAAACTCTTGGAGAAAAGTTTGAAACCCCTCACAGCCTGGTGCCAATGAGGAAAGCTTTCAATGGAACTTTTATAGTTGCTGGAGGTTATGGACGACAAGATGGGATCAATGCTATAGCTGAAAACAGGGCAGACCTTGTTGTTTATGGTCGTTTGTTCTTAGCCAATCCAGATCTACCAAAGAGATTTGCGCTTGATGCTCCTCTCAACAAGTACAAGCGGGAGACATTCTACGTTTCTGACCCGGTTGTTGGTTACACCGACTACCCGTTTCTTGAATGA 1080 0.4657 MASPNNPLITPYKMGNFNLSHRIVLAPLARMRSYNNVPQPHATLYYSQRSSQGGLLIAEATGVSDTAQGYPNTPGIWTKEQVLAWKPIVDAVHAKGALFFCQIVHVGRVSSSSFQPNGQAPISSTDKPLAPQDGMEFTPPRRLTKEEIPQIVHDFRLAARNAIQAGFDGVEIHGAHGYLLDQFMKDKVNDRTDEYGGSLENRCRFPLEIVEAVASEIGAERVGIRLSPFADYAESGDSSPDELGLYMANALNKYNILYCHMVEPRMKTLGEKFETPHSLVPMRKAFNGTFIVAGGYGRQDGINAIAENRADLVVYGRLFLANPDLPKRFALDAPLNKYKRETFYVSDPVVGYTDYPFLE* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g1600 359 SUPERFAMILY FMN-linked oxidoreductases 4 358 - -
Lja1g1600 359 CDD OYE_like_FMN 7 340 - -
Lja1g1600 359 Gene3D Aldolase class I 2 359 IPR013785 -
Lja1g1600 359 PANTHER 12-OXOPHYTODIENOATE REDUCTASE 1-RELATED 7 359 - -
Lja1g1600 359 Pfam NADH:flavin oxidoreductase / NADH oxidase family 8 332 IPR001155 GO:0010181|GO:0016491
Lja1g1600 359 PANTHER NADH OXIDOREDUCTASE-RELATED 7 359 IPR045247 GO:0010181|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g1600 Lja-Chr1 17352184 17353263 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g1600 2 359 Acyl Lipid Metabolism Gene Families AT1G76690 74.725 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g1600 K05894 - gmx:100803381 619.387